RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 LGALS9BQ3B8N2 356 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 LGALS9CQ6DKI2 356 aa17.28■□□□□ 0.36
VPS16-201ENST00000380443 TFPI2P48307 235 aa17.27■□□□□ 0.36
VPS16-201ENST00000380443 SCGB2A2Q13296 93 aa17.27■□□□□ 0.36
VPS16-201ENST00000380443 NRACQ8N912 160 aa17.27■□□□□ 0.36
VPS16-201ENST00000380443 PPP1R17O96001 155 aa17.26■□□□□ 0.35
VPS16-201ENST00000380443 Q6ZN92 141 aa17.26■□□□□ 0.35
VPS16-201ENST00000380443 OR1N2Q8NGR9 330 aa17.26■□□□□ 0.35
VPS16-201ENST00000380443 DUX5Q96PT3 197 aa17.26■□□□□ 0.35
VPS16-201ENST00000380443 MRPS16Q9Y3D3 137 aaKnown RBP17.26■□□□□ 0.35
VPS16-201ENST00000380443 TIMM8BQ9Y5J9 83 aaPredicted RBP17.26■□□□□ 0.35
VPS16-201ENST00000380443 M0R381 172 aa17.26■□□□□ 0.35
VPS16-201ENST00000380443 EREGO14944 169 aa17.26■□□□□ 0.35
VPS16-201ENST00000380443 RNASE3P12724 160 aaKnown RBP17.26■□□□□ 0.35
VPS16-201ENST00000380443 HNRNPA3P51991 378 aaKnown RBP17.26■□□□□ 0.35
VPS16-201ENST00000380443 Q6ZSV7 163 aa17.26■□□□□ 0.35
VPS16-201ENST00000380443 IGLV2-18A0A075B6J9 118 aa17.25■□□□□ 0.35
VPS16-201ENST00000380443 DNAJC9-AS1A6NH13 148 aa17.25■□□□□ 0.35
VPS16-201ENST00000380443 MAJINQ3KP22 176 aa17.25■□□□□ 0.35
VPS16-201ENST00000380443 IFI27L1Q96BM0 104 aa17.25■□□□□ 0.35
VPS16-201ENST00000380443 AP1S3Q96PC3 154 aa17.25■□□□□ 0.35
VPS16-201ENST00000380443 ZANQ9Y493 2812 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 GNRH2O43555 120 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 KRTAP1-1Q07627 177 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 POM121L12Q8N7R1 296 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 OR11H1Q8NG94 326 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 OR9G4Q8NGQ1 327 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 C20orf78Q9BR46 151 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 K7EMI3 77 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 GAS8-AS1O95177 125 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 CDKN1BP46527 198 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 SLURP1P55000 103 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 KIR3DS1Q14943 382 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 SELENOKQ9Y6D0 94 aa17.24■□□□□ 0.35
VPS16-201ENST00000380443 ADAMTSL5Q6ZMM2 481 aa17.23■□□□□ 0.35
VPS16-201ENST00000380443 GATA1P15976 413 aaPredicted RBP17.22■□□□□ 0.35
VPS16-201ENST00000380443 YAE1D1Q9NRH1 226 aa17.22■□□□□ 0.35
VPS16-201ENST00000380443 LAGE3Q14657 143 aa17.21■□□□□ 0.35
VPS16-201ENST00000380443 GOLT1BQ9Y3E0 138 aa17.21■□□□□ 0.35
VPS16-201ENST00000380443 TRAV12-3A0A0B4J271 114 aa17.2■□□□□ 0.34
VPS16-201ENST00000380443 H0Y8G0 127 aa17.2■□□□□ 0.34
VPS16-201ENST00000380443 A8MTW9 85 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 C18orf65Q6ZTR6 163 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 KLHL30-AS1Q8NEE0 82 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 A0A1B0GV90 55 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 hDV102S1A0JD36 115 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 ATP5LO75964 103 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 CD7P09564 240 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 DEFB136Q30KP8 78 aa17.19■□□□□ 0.34
VPS16-201ENST00000380443 SMIM17P0DL12 118 aa17.18■□□□□ 0.34
VPS16-201ENST00000380443 NUTF2P61970 127 aaKnown RBP17.18■□□□□ 0.34
VPS16-201ENST00000380443 C14orf178Q8N769 122 aaPredicted RBP17.18■□□□□ 0.34
VPS16-201ENST00000380443 PMCHL2Q9BQD1 86 aa17.18■□□□□ 0.34
VPS16-201ENST00000380443 SMIM2Q9BVW6 85 aa17.18■□□□□ 0.34
VPS16-201ENST00000380443 TEP1Q99973 2627 aaKnown RBP17.18■□□□□ 0.34
VPS16-201ENST00000380443 TRAV26-2A0A0B4J265 109 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 KHDC1LQ5JSQ8 128 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 SLC25A34Q6PIV7 304 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 C9orf85Q96MD7 179 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 IGHV1OR15-1A0A075B7D0 117 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 AMTNQ6UX39 209 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 SYT8Q8NBV8 401 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 TMEM158Q8WZ71 300 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 C16orf95Q9H693 158 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 TMEM160Q9NX00 188 aa17.17■□□□□ 0.34
VPS16-201ENST00000380443 IGHV3-16A0A0C4DH30 117 aa17.16■□□□□ 0.34
VPS16-201ENST00000380443 SUMO2P61956 95 aaKnown RBP17.16■□□□□ 0.34
VPS16-201ENST00000380443 RPL32P62910 135 aaKnown RBP17.16■□□□□ 0.34
VPS16-201ENST00000380443 ORMDL2Q53FV1 153 aa17.16■□□□□ 0.34
VPS16-201ENST00000380443 DYNLRB2Q8TF09 96 aa17.16■□□□□ 0.34
VPS16-201ENST00000380443 RASL10AQ92737 203 aa17.16■□□□□ 0.34
VPS16-201ENST00000380443 KIF25-AS1Q9Y6Z4 181 aa17.16■□□□□ 0.34
VPS16-201ENST00000380443 RNASE1P07998 156 aaKnown RBP17.15■□□□□ 0.34
VPS16-201ENST00000380443 DLX4Q92988 240 aaPredicted RBP17.15■□□□□ 0.34
VPS16-201ENST00000380443 TRAV25A0A0B4J276 109 aa17.14■□□□□ 0.34
VPS16-201ENST00000380443 HLA-DRB4P13762 266 aa17.14■□□□□ 0.34
VPS16-201ENST00000380443 FXYD7P58549 80 aa17.14■□□□□ 0.34
VPS16-201ENST00000380443 HLA-DRB4X5D2U9 266 aa17.14■□□□□ 0.34
VPS16-201ENST00000380443 HIVEP2P31629 2446 aa17.14■□□□□ 0.33
VPS16-201ENST00000380443 TRGV11A0A075B6L2 103 aa17.14■□□□□ 0.33
VPS16-201ENST00000380443 INAFM1C9JVW0 142 aa17.14■□□□□ 0.33
VPS16-201ENST00000380443 COL5A1-AS1Q5SY13 56 aa17.14■□□□□ 0.33
VPS16-201ENST00000380443 MCRIP2Q9BUT9 160 aaKnown RBP17.14■□□□□ 0.33
VPS16-201ENST00000380443 ESM1Q9NQ30 184 aa17.14■□□□□ 0.33
VPS16-201ENST00000380443 TLN2Q9Y4G6 2542 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 IGKV3-20P01619 116 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 MGPP08493 103 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 G0S2P27469 103 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 SPINK13Q1W4C9 94 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 DEFB114Q30KQ6 69 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 LINC00315P59091 139 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 DEFB131AP59861 70 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 FHL3Q13643 280 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 SPAG8Q99932 426 aaPredicted RBP17.12■□□□□ 0.33
VPS16-201ENST00000380443 MXRA5Q9NR99 2828 aa17.12■□□□□ 0.33
VPS16-201ENST00000380443 LINC01549A6NIU2 74 aa17.11■□□□□ 0.33
VPS16-201ENST00000380443 COX8AP10176 69 aa17.11■□□□□ 0.33
VPS16-201ENST00000380443 TMEM61Q8N0U2 210 aa17.11■□□□□ 0.33
VPS16-201ENST00000380443 MTORP42345 2549 aa17.11■□□□□ 0.33
VPS16-201ENST00000380443 TRAV12-2A0A075B6T6 113 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms