RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 LINC00173Q6ZV60 143 aa7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 SCRT2Q9NQ03 307 aa7.86□□□□□ -1.15
POLR2J3-201ENST00000379340 A0A096LNJ9 63 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 TRAV2A0A0B4J234 112 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 F6UB75 175 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 LINC01619G3V211 115 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 EDN2P20800 178 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 ANXA2RQ3ZCQ2 193 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 ATOH7Q8N100 152 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 Q8N8P6 123 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 C4orf3Q8WVX3 66 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 SNHG12Q9BXW3 62 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 PEMTQ9UBM1 199 aa7.85□□□□□ -1.15
POLR2J3-201ENST00000379340 A0A0J9YX75 114 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 J3KRW8 73 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 EREGO14944 169 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 SRD5A1P18405 259 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 EVI2AP22794 236 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 TSPOP30536 169 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 HNRNPA3P51991 378 aaKnown RBP7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 LGALS9BQ3B8N2 356 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 LGALS9CQ6DKI2 356 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 WFDC3Q8IUB2 231 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 OR2K2Q8NGT1 345 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 DPH3P1Q9H4G8 78 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 PHLDA3Q9Y5J5 127 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 C7orf71A4D174 169 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 M0R381 172 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 CD5LO43866 347 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 NXPH4O95158 308 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 IGLL1P15814 213 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 FCER1GP30273 86 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 DEFB1P60022 68 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 SCGB2A2Q13296 93 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 PSMG4Q5JS54 123 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 FAM159AQ6UWV7 190 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 Q6ZN92 141 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 FOXI2Q6ZQN5 318 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 AP1S3Q96PC3 154 aa7.84□□□□□ -1.15
POLR2J3-201ENST00000379340 TENM1Q9UKZ4 2725 aa7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 PPP1R17O96001 155 aa7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 ZNF688P0C7X2 276 aa7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 Q6ZQT7 251 aa7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 NRACQ8N912 160 aa7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 DPF1Q92782 380 aa7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 MRPS16Q9Y3D3 137 aaKnown RBP7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 TIMM8BQ9Y5J9 83 aaPredicted RBP7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 MGAM2Q2M2H8 2515 aa7.83□□□□□ -1.16
POLR2J3-201ENST00000379340 TGP01266 2768 aa7.82□□□□□ -1.16
POLR2J3-201ENST00000379340 K7EMI3 77 aa7.82□□□□□ -1.16
POLR2J3-201ENST00000379340 TFPI2P48307 235 aa7.82□□□□□ -1.16
POLR2J3-201ENST00000379340 TCTEX1D4Q5JR98 221 aa7.82□□□□□ -1.16
POLR2J3-201ENST00000379340 POM121L12Q8N7R1 296 aa7.82□□□□□ -1.16
POLR2J3-201ENST00000379340 IFI27L1Q96BM0 104 aa7.82□□□□□ -1.16
POLR2J3-201ENST00000379340 C20orf78Q9BR46 151 aa7.82□□□□□ -1.16
POLR2J3-201ENST00000379340 IGLV2-18A0A075B6J9 118 aa7.81□□□□□ -1.16
POLR2J3-201ENST00000379340 DNAJC9-AS1A6NH13 148 aa7.81□□□□□ -1.16
POLR2J3-201ENST00000379340 RNASE3P12724 160 aaKnown RBP7.81□□□□□ -1.16
POLR2J3-201ENST00000379340 CDKN1BP46527 198 aa7.81□□□□□ -1.16
POLR2J3-201ENST00000379340 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
POLR2J3-201ENST00000379340 Q6ZSV7 163 aa7.81□□□□□ -1.16
POLR2J3-201ENST00000379340 OR1N2Q8NGR9 330 aa7.81□□□□□ -1.16
POLR2J3-201ENST00000379340 A0A1B0GV90 55 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 GNRH2O43555 120 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 SLURP1P55000 103 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 NUTF2P61970 127 aaKnown RBP7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 LAGE3Q14657 143 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 OR11H1Q8NG94 326 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 OR9G4Q8NGQ1 327 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 PMCHL2Q9BQD1 86 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 GOLT1BQ9Y3E0 138 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 A8MTW9 85 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 H0Y8G0 127 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 ATP5LO75964 103 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 GAS8-AS1O95177 125 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 GATA1P15976 413 aaPredicted RBP7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 KIR3DS1Q14943 382 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 DUX5Q96PT3 197 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 SMIM2Q9BVW6 85 aa7.8□□□□□ -1.16
POLR2J3-201ENST00000379340 IGHV1OR15-1A0A075B7D0 117 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 TRAV12-3A0A0B4J271 114 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 CD7P09564 240 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 SMIM17P0DL12 118 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 RPL32P62910 135 aaKnown RBP7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 ORMDL2Q53FV1 153 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 ADAMTSL5Q6ZMM2 481 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 SYT8Q8NBV8 401 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 KLHL30-AS1Q8NEE0 82 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 C9orf85Q96MD7 179 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 SELENOKQ9Y6D0 94 aa7.79□□□□□ -1.16
POLR2J3-201ENST00000379340 TRGV11A0A075B6L2 103 aa7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 TRAV26-2A0A0B4J265 109 aa7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 SUMO2P61956 95 aaKnown RBP7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 DEFB136Q30KP8 78 aa7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 KHDC1LQ5JSQ8 128 aa7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 COL5A1-AS1Q5SY13 56 aa7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 C18orf65Q6ZTR6 163 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms