RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PYGO2Q9BRQ0 406 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 TANC1Q9C0D5 1861 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 EGR2P11161 476 aaPredicted RBP9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 SH2D6Q7Z4S9 175 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 IGLV3-9A0A075B6K5 115 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 IGHV4-61A0A0C4DH41 118 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 HAMPP81172 84 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 UBL5Q9BZL1 73 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 FOXE3Q13461 319 aa9.43□□□□□ -0.9
PCDHA9-201ENST00000378122 B5MCH6 92 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 RHODO00212 210 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 IGHV4-38-2P0DP08 117 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 GTSF1Q8WW33 167 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 SMAD5-AS1Q9Y6J3 95 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 PROP1O75360 226 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 IGLV1-44P01699 117 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 SLURP1P55000 103 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 TMEM243Q9BU79 118 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 CRLF1O75462 422 aa9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 GATA1P15976 413 aaPredicted RBP9.42□□□□□ -0.9
PCDHA9-201ENST00000378122 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 FGF23Q9GZV9 251 aaPredicted RBP9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 IGHG4P01861 327 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 ZNF491Q8N8L2 437 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 C20orf78Q9BR46 151 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 CRYBA4P53673 196 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 SPANXDQ9BXN6 97 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 MED13Q9UHV7 2174 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 F6UB75 175 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 HOXB4P17483 251 aaPredicted RBP9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 RNASE8Q8TDE3 154 aaKnown RBP9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 TRAV13-2A0A0B4J235 113 aa9.41□□□□□ -0.9
PCDHA9-201ENST00000378122 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.9
PCDHA9-201ENST00000378122 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
PCDHA9-201ENST00000378122 RITA1Q96K30 269 aa9.4□□□□□ -0.9
PCDHA9-201ENST00000378122 DSCR8Q96T75 97 aa9.4□□□□□ -0.9
PCDHA9-201ENST00000378122 CFC1BP0CG36 223 aa9.4□□□□□ -0.91
PCDHA9-201ENST00000378122 CFC1P0CG37 223 aa9.4□□□□□ -0.91
PCDHA9-201ENST00000378122 C11orf53Q8IXP5 236 aa9.39□□□□□ -0.91
PCDHA9-201ENST00000378122 HEATR5AQ86XA9 2040 aa9.39□□□□□ -0.91
PCDHA9-201ENST00000378122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
PCDHA9-201ENST00000378122 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
PCDHA9-201ENST00000378122 COA6Q5JTJ3 125 aaKnown RBP9.39□□□□□ -0.91
PCDHA9-201ENST00000378122 BOD1L2Q8IYS8 172 aa9.39□□□□□ -0.91
PCDHA9-201ENST00000378122 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
PCDHA9-201ENST00000378122 HERVK_113P63121 156 aa9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 DENND4CQ5VZ89 1909 aa9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 SHISA9B4DS77 424 aa9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 RPL39LQ96EH5 51 aaKnown RBP9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 BAALC-AS2P0C853 105 aa9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 RNF138Q8WVD3 245 aa9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 FAM110AQ9BQ89 295 aa9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 PRORYQ9H606 182 aa9.38□□□□□ -0.91
PCDHA9-201ENST00000378122 NUP210Q8TEM1 1887 aaPredicted RBP9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 LY6G6DO95868 133 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 ADORA2A-AS1P86434 159 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 ANKRD39Q53RE8 183 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 BUB3O43684 328 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 FOXI2Q6ZQN5 318 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 NCKAP5O14513 1909 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 PLA2G2AP14555 144 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 FANCD2OSQ96PS1 177 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
PCDHA9-201ENST00000378122 TAX1BP3O14907 124 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 IL17DQ8TAD2 202 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 POU2AF1Q16633 256 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 KRTAP27-1Q3LI81 207 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 CTSZQ9UBR2 303 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 AGPAT4-IT1Q9H0P7 198 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 FAM215AQ9Y5M1 114 aa9.36□□□□□ -0.91
PCDHA9-201ENST00000378122 A0A096LNI7 61 aa9.35□□□□□ -0.91
PCDHA9-201ENST00000378122 ZNF503Q96F45 646 aa9.35□□□□□ -0.91
PCDHA9-201ENST00000378122 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
PCDHA9-201ENST00000378122 KIF26AQ9ULI4 1882 aaPredicted RBP9.35□□□□□ -0.91
PCDHA9-201ENST00000378122 C2orf16Q68DN1 1984 aa9.35□□□□□ -0.91
PCDHA9-201ENST00000378122 MUC6Q6W4X9 2439 aa9.35□□□□□ -0.91
PCDHA9-201ENST00000378122 NPBQ8NG41 125 aa9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 TIRAPP58753 221 aa9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 WFDC2Q14508 124 aa9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 FXYD2P54710 66 aa9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 MUSTN1Q8IVN3 82 aa9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 SPTAN1Q13813 2472 aaKnown RBP9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 BAALCQ8WXS3 180 aa9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 Q9H8V8 135 aa9.34□□□□□ -0.91
PCDHA9-201ENST00000378122 ICOSQ9Y6W8 199 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 RHOHQ15669 191 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 G3V4G9 280 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 CRYGCP07315 174 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 MSRB1Q9NZV6 116 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 ORMDL1Q9P0S3 153 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 U3KQE9 123 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 UBE2AP49459 152 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 PATE2Q6UY27 113 aa9.33□□□□□ -0.92
PCDHA9-201ENST00000378122 I3L2K1 104 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms