RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TOMM6Q96B49 74 aa19.1■□□□□ 0.65
C9orf40-201ENST00000376854 GNRH2O43555 120 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 MED14OSP0DP75 135 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 OR5A1Q8NGJ0 315 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 TM2D2Q9BX73 214 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 F8VRH5 84 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 K7ERJ3 54 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 SLC25A16P16260 332 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 Q6ZS46 218 aa19.09■□□□□ 0.65
C9orf40-201ENST00000376854 IGHV4-30-2A0A087WSY4 118 aa19.08■□□□□ 0.65
C9orf40-201ENST00000376854 APRG1Q8IVJ8 170 aa19.08■□□□□ 0.65
C9orf40-201ENST00000376854 SAP30O75446 220 aa19.08■□□□□ 0.64
C9orf40-201ENST00000376854 DOPEY1Q5JWR5 2465 aa19.08■□□□□ 0.64
C9orf40-201ENST00000376854 SPOCK3Q9BQ16 436 aa19.07■□□□□ 0.64
C9orf40-201ENST00000376854 RNASE3P12724 160 aaKnown RBP19.07■□□□□ 0.64
C9orf40-201ENST00000376854 NHP2Q9NX24 153 aaKnown RBP19.07■□□□□ 0.64
C9orf40-201ENST00000376854 CHTOPQ9Y3Y2 248 aaKnown RBP19.07■□□□□ 0.64
C9orf40-201ENST00000376854 CSMD2Q7Z408 3487 aa19.06■□□□□ 0.64
C9orf40-201ENST00000376854 K7EMI3 77 aa19.06■□□□□ 0.64
C9orf40-201ENST00000376854 TRBV7-9A0A0J9YWB2 115 aa19.06■□□□□ 0.64
C9orf40-201ENST00000376854 RNF223E7ERA6 249 aa19.06■□□□□ 0.64
C9orf40-201ENST00000376854 ATP5J2P56134 94 aa19.06■□□□□ 0.64
C9orf40-201ENST00000376854 PHLDA1Q8WV24 401 aaPredicted RBP19.06■□□□□ 0.64
C9orf40-201ENST00000376854 DAZ1Q9NQZ3 744 aaKnown RBP19.06■□□□□ 0.64
C9orf40-201ENST00000376854 NEXN-AS1Q8NBZ9 246 aa19.05■□□□□ 0.64
C9orf40-201ENST00000376854 IGLV1-40P01703 118 aa19.05■□□□□ 0.64
C9orf40-201ENST00000376854 SRD5A1P18405 259 aa19.05■□□□□ 0.64
C9orf40-201ENST00000376854 CLEC2AQ6UVW9 174 aa19.05■□□□□ 0.64
C9orf40-201ENST00000376854 C2orf66Q6UXQ4 117 aa19.03■□□□□ 0.64
C9orf40-201ENST00000376854 NDUFS8O00217 210 aa19.03■□□□□ 0.64
C9orf40-201ENST00000376854 TAL2Q16559 108 aa19.03■□□□□ 0.64
C9orf40-201ENST00000376854 MYO18BQ8IUG5 2567 aa19.02■□□□□ 0.64
C9orf40-201ENST00000376854 PPP1R17O96001 155 aa19.01■□□□□ 0.63
C9orf40-201ENST00000376854 BAALCQ8WXS3 180 aa19.01■□□□□ 0.63
C9orf40-201ENST00000376854 MSMBP08118 114 aa19.01■□□□□ 0.63
C9orf40-201ENST00000376854 EDN2P20800 178 aa19.01■□□□□ 0.63
C9orf40-201ENST00000376854 NEGR1Q7Z3B1 354 aa19.01■□□□□ 0.63
C9orf40-201ENST00000376854 NRGNQ92686 78 aa19.01■□□□□ 0.63
C9orf40-201ENST00000376854 CSTL1Q9H114 145 aa19.01■□□□□ 0.63
C9orf40-201ENST00000376854 OR11H12B2RN74 326 aa19■□□□□ 0.63
C9orf40-201ENST00000376854 OR11H1Q8NG94 326 aa19■□□□□ 0.63
C9orf40-201ENST00000376854 OR11H2Q8NH07 326 aa19■□□□□ 0.63
C9orf40-201ENST00000376854 HIST1H4GQ99525 98 aa19■□□□□ 0.63
C9orf40-201ENST00000376854 NXPH4O95158 308 aa19■□□□□ 0.63
C9orf40-201ENST00000376854 ACACBO00763 2458 aa18.99■□□□□ 0.63
C9orf40-201ENST00000376854 KLLNB2CW77 178 aa18.99■□□□□ 0.63
C9orf40-201ENST00000376854 POM121L12Q8N7R1 296 aa18.99■□□□□ 0.63
C9orf40-201ENST00000376854 MYMXA0A1B0GTQ4 84 aa18.99■□□□□ 0.63
C9orf40-201ENST00000376854 CFHR3Q02985 330 aa18.99■□□□□ 0.63
C9orf40-201ENST00000376854 ID1P41134 155 aa18.98■□□□□ 0.63
C9orf40-201ENST00000376854 FAM159AQ6UWV7 190 aa18.98■□□□□ 0.63
C9orf40-201ENST00000376854 AVPP01185 164 aa18.97■□□□□ 0.63
C9orf40-201ENST00000376854 KIF25-AS1Q9Y6Z4 181 aa18.97■□□□□ 0.63
C9orf40-201ENST00000376854 PRSS29PA6NIE9 313 aa18.97■□□□□ 0.63
C9orf40-201ENST00000376854 G3V4G9 280 aa18.96■□□□□ 0.63
C9orf40-201ENST00000376854 K7EMT4 169 aa18.96■□□□□ 0.63
C9orf40-201ENST00000376854 LINC00315P59091 139 aa18.96■□□□□ 0.63
C9orf40-201ENST00000376854 WFDC12Q8WWY7 111 aa18.96■□□□□ 0.63
C9orf40-201ENST00000376854 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.96■□□□□ 0.63
C9orf40-201ENST00000376854 C12orf74Q32Q52 190 aa18.96■□□□□ 0.63
C9orf40-201ENST00000376854 DCANP1Q8TF63 244 aa18.96■□□□□ 0.63
C9orf40-201ENST00000376854 IGLL5B9A064 214 aa18.95■□□□□ 0.62
C9orf40-201ENST00000376854 TMEM95Q3KNT9 176 aa18.95■□□□□ 0.62
C9orf40-201ENST00000376854 E9PLD3 99 aa18.95■□□□□ 0.62
C9orf40-201ENST00000376854 TRBV7-3A0A075B6L6 115 aa18.94■□□□□ 0.62
C9orf40-201ENST00000376854 COTL1Q14019 142 aa18.94■□□□□ 0.62
C9orf40-201ENST00000376854 JPT2Q9H910 190 aa18.94■□□□□ 0.62
C9orf40-201ENST00000376854 ZFYVE26Q68DK2 2539 aa18.94■□□□□ 0.62
C9orf40-201ENST00000376854 CSPG4Q6UVK1 2322 aa18.93■□□□□ 0.62
C9orf40-201ENST00000376854 IGHV4OR15-8A0A075B7B6 117 aa18.93■□□□□ 0.62
C9orf40-201ENST00000376854 A0A087WW49 117 aa18.93■□□□□ 0.62
C9orf40-201ENST00000376854 DUSP14O95147 198 aaKnown RBP18.93■□□□□ 0.62
C9orf40-201ENST00000376854 LINC01619G3V211 115 aa18.92■□□□□ 0.62
C9orf40-201ENST00000376854 CYSLTR1Q9Y271 337 aa18.92■□□□□ 0.62
C9orf40-201ENST00000376854 TRAV12-3A0A0B4J271 114 aa18.92■□□□□ 0.62
C9orf40-201ENST00000376854 CD7P09564 240 aa18.92■□□□□ 0.62
C9orf40-201ENST00000376854 SAMD13Q5VXD3 122 aa18.92■□□□□ 0.62
C9orf40-201ENST00000376854 ZNF479Q96JC4 524 aa18.92■□□□□ 0.62
C9orf40-201ENST00000376854 PRADC1Q9BSG0 188 aa18.92■□□□□ 0.62
C9orf40-201ENST00000376854 SUMO4Q6EEV6 95 aa18.91■□□□□ 0.62
C9orf40-201ENST00000376854 CENPEQ02224 2701 aa18.91■□□□□ 0.62
C9orf40-201ENST00000376854 MUC4Q99102 2169 aa18.91■□□□□ 0.62
C9orf40-201ENST00000376854 A0A087WWL8 130 aa18.91■□□□□ 0.62
C9orf40-201ENST00000376854 LGALS1P09382 135 aaKnown RBP18.91■□□□□ 0.62
C9orf40-201ENST00000376854 RPL32P62910 135 aaKnown RBP18.91■□□□□ 0.62
C9orf40-201ENST00000376854 ZANQ9Y493 2812 aa18.9■□□□□ 0.62
C9orf40-201ENST00000376854 POLQO75417 2590 aa18.9■□□□□ 0.62
C9orf40-201ENST00000376854 B4DSR2 109 aa18.9■□□□□ 0.62
C9orf40-201ENST00000376854 PSMB8P28062 276 aa18.9■□□□□ 0.62
C9orf40-201ENST00000376854 TP53TG1Q9Y2A0 90 aa18.9■□□□□ 0.62
C9orf40-201ENST00000376854 RIPPLY3P57055 190 aa18.89■□□□□ 0.61
C9orf40-201ENST00000376854 FOXI2Q6ZQN5 318 aa18.89■□□□□ 0.61
C9orf40-201ENST00000376854 DEFB104AQ8WTQ1 72 aa18.89■□□□□ 0.61
C9orf40-201ENST00000376854 FBN2P35556 2912 aa18.89■□□□□ 0.61
C9orf40-201ENST00000376854 F5H697 171 aa18.89■□□□□ 0.61
C9orf40-201ENST00000376854 CRYGDP07320 174 aa18.89■□□□□ 0.61
C9orf40-201ENST00000376854 POLR2KP53803 58 aaKnown RBP18.89■□□□□ 0.61
C9orf40-201ENST00000376854 ZFP2Q6ZN57 461 aa18.89■□□□□ 0.61
C9orf40-201ENST00000376854 SCGB2A2Q13296 93 aa18.88■□□□□ 0.61
C9orf40-201ENST00000376854 USP9YO00507 2555 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms