RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 Q71RC1 249 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-205ENST00000376636 MBD3L4A6NDZ8 208 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-205ENST00000376636 MBD3L3A6NE82 208 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-205ENST00000376636 MBD3L5A6NJ08 208 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-205ENST00000376636 TEX36Q5VZQ5 186 aa9.27□□□□□ -0.93
VPS13A-205ENST00000376636 MBD3L2Q8NHZ7 208 aaPredicted RBP9.27□□□□□ -0.93
VPS13A-205ENST00000376636 TEX22C9J3V5 150 aa9.27□□□□□ -0.93
VPS13A-205ENST00000376636 MSMBP08118 114 aa9.27□□□□□ -0.93
VPS13A-205ENST00000376636 ZNF833PQ6ZTB9 187 aa9.26□□□□□ -0.93
VPS13A-205ENST00000376636 PRDM6Q9NQX0 595 aa9.26□□□□□ -0.93
VPS13A-205ENST00000376636 CSRP1P21291 193 aaKnown RBP9.26□□□□□ -0.93
VPS13A-205ENST00000376636 MRPL23Q16540 153 aaKnown RBP9.26□□□□□ -0.93
VPS13A-205ENST00000376636 SEM1Q6ZVN7 128 aa9.26□□□□□ -0.93
VPS13A-205ENST00000376636 A0A087WV48 116 aa9.26□□□□□ -0.93
VPS13A-205ENST00000376636 IGHV2-5P01817 119 aa9.26□□□□□ -0.93
VPS13A-205ENST00000376636 SPACA3Q8IXA5 215 aa9.26□□□□□ -0.93
VPS13A-205ENST00000376636 NDUFC2-KCTD14E9PQ53 114 aa9.26□□□□□ -0.93
VPS13A-205ENST00000376636 RNF183Q96D59 192 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 BPESC1Q9GZL8 116 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 PNRC2Q9NPJ4 139 aaKnown RBP9.25□□□□□ -0.93
VPS13A-205ENST00000376636 CEP192Q8TEP8 1941 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 C10orf91Q5T1B1 145 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 NOP10Q9NPE3 64 aaKnown RBP9.25□□□□□ -0.93
VPS13A-205ENST00000376636 QRFPP83859 136 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 VOPP1Q96AW1 172 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 J3QLI3 93 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 ZNF106Q9H2Y7 1883 aaKnown RBP9.25□□□□□ -0.93
VPS13A-205ENST00000376636 BRWD3Q6RI45 1802 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 H3BT86 120 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 MST1P26927 711 aa9.25□□□□□ -0.93
VPS13A-205ENST00000376636 UPK3BQ9BT76 320 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 A0A0G2JNJ9 132 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 IGHV7-4-1A0A0J9YVY3 117 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 K7EQD1 137 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 Q9UFV3 132 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 Q6ZUT4 128 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 FOXI1Q12951 378 aa9.24□□□□□ -0.93
VPS13A-205ENST00000376636 K7EM74 188 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 A0A096LPF7 62 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 MPLKIPQ8TAP9 179 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 C16orf74Q96GX8 76 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 Q9HAA7 133 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 H3BUA1 57 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-205ENST00000376636 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
VPS13A-205ENST00000376636 NDUFA1O15239 70 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 ZNF747Q9BV97 191 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 UQCRQO14949 82 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 NDUFC1O43677 76 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 IGLC1P0CG04 106 aa9.23□□□□□ -0.93
VPS13A-205ENST00000376636 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 EXPH5Q8NEV8 1989 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 IGHV1-69P01742 117 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 KIR2DL5BQ8NHK3 375 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 FAM110AQ9BQ89 295 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 PTPN13Q12923 2485 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 LY6DQ14210 128 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 FXYD5Q96DB9 178 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 CCL18P55774 89 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 FAM208BQ5VWN6 2430 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 ATP5EP2Q5VTU8 51 aa9.22□□□□□ -0.93
VPS13A-205ENST00000376636 SONP18583 2426 aaKnown RBP9.21□□□□□ -0.93
VPS13A-205ENST00000376636 Q6ZQT7 251 aa9.21□□□□□ -0.93
VPS13A-205ENST00000376636 FAM236DA0A1B0GTK5 79 aa9.21□□□□□ -0.93
VPS13A-205ENST00000376636 FAM236CP0DP71 79 aa9.21□□□□□ -0.93
VPS13A-205ENST00000376636 TM2D2Q9BX73 214 aa9.21□□□□□ -0.94
VPS13A-205ENST00000376636 KIAA1671Q9BY89 1806 aa9.21□□□□□ -0.94
VPS13A-205ENST00000376636 TNS1Q9HBL0 1735 aaKnown RBP9.21□□□□□ -0.94
VPS13A-205ENST00000376636 A4D1N5 150 aa9.21□□□□□ -0.94
VPS13A-205ENST00000376636 B9D2Q9BPU9 175 aa9.21□□□□□ -0.94
VPS13A-205ENST00000376636 HIGD1BQ9P298 99 aa9.21□□□□□ -0.94
VPS13A-205ENST00000376636 ANKRD39Q53RE8 183 aa9.21□□□□□ -0.94
VPS13A-205ENST00000376636 Q6ZRM9 215 aa9.2□□□□□ -0.94
VPS13A-205ENST00000376636 ALPK3Q96L96 1907 aa9.2□□□□□ -0.94
VPS13A-205ENST00000376636 A0A0G2JRQ6 117 aa9.2□□□□□ -0.94
VPS13A-205ENST00000376636 IGHV4OR15-8A0A075B7B6 117 aa9.2□□□□□ -0.94
VPS13A-205ENST00000376636 A0A087WW49 117 aa9.2□□□□□ -0.94
VPS13A-205ENST00000376636 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
VPS13A-205ENST00000376636 NDUFV3P56181 108 aaKnown RBP9.2□□□□□ -0.94
VPS13A-205ENST00000376636 LYPD3O95274 346 aa9.2□□□□□ -0.94
VPS13A-205ENST00000376636 LYPD2Q6UXB3 125 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 WDR90Q96KV7 1748 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 C17orf77Q96MU5 243 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 ATG2AQ2TAZ0 1938 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 G3V4G9 280 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 Q8TCH9 128 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 GYPEP15421 78 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 C10orf105Q8TEF2 133 aa9.19□□□□□ -0.94
VPS13A-205ENST00000376636 TRBV7-3A0A075B6L6 115 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 MLANAQ16655 118 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 FGF23Q9GZV9 251 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-205ENST00000376636 TECTAO75443 2155 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 WIPF3A6NGB9 483 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 RUSC1-AS1Q66K80 236 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 BPY2O14599 106 aa9.18□□□□□ -0.94
VPS13A-205ENST00000376636 LECT2O14960 151 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms