RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
VPS13A-204ENST00000376634 FOXI2Q6ZQN5 318 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 PRR25Q96S07 402 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 B5MCH6 92 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 C4orf48Q5BLP8 95 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 Q6ZWC4 215 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 SIVA1O15304 175 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 IGF2RP11717 2491 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 H3BRN7 92 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 PYGO2Q9BRQ0 406 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 MRPL36Q9P0J6 103 aaKnown RBP9.93□□□□□ -0.82
VPS13A-204ENST00000376634 PRSS47A8MTI9 375 aa9.93□□□□□ -0.82
VPS13A-204ENST00000376634 ZNRD1Q9P1U0 126 aa9.92□□□□□ -0.82
VPS13A-204ENST00000376634 PKD1L2Q7Z442 2459 aa9.92□□□□□ -0.82
VPS13A-204ENST00000376634 SP5Q6BEB4 398 aaPredicted RBP9.92□□□□□ -0.82
VPS13A-204ENST00000376634 ZNF493Q6ZR52 646 aa9.92□□□□□ -0.82
VPS13A-204ENST00000376634 SH2D6Q7Z4S9 175 aa9.92□□□□□ -0.82
VPS13A-204ENST00000376634 Q6ZQT7 251 aa9.92□□□□□ -0.82
VPS13A-204ENST00000376634 C5orf63A6NC05 138 aa9.92□□□□□ -0.82
VPS13A-204ENST00000376634 COL5A1P20908 1838 aaPredicted RBP9.92□□□□□ -0.82
VPS13A-204ENST00000376634 A0A1B0GX51 115 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 Q9H8V8 135 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 NAV2Q8IVL1 2488 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 COL4A6Q14031 1691 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 Q6ZS92 163 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 B3GALT5-AS1P59052 145 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 IGHV4-28A0A0C4DH34 117 aa9.91□□□□□ -0.82
VPS13A-204ENST00000376634 PROP1O75360 226 aa9.9□□□□□ -0.82
VPS13A-204ENST00000376634 HERV-K104P63124 156 aa9.9□□□□□ -0.82
VPS13A-204ENST00000376634 MLANAQ16655 118 aa9.9□□□□□ -0.82
VPS13A-204ENST00000376634 ZNF581Q9P0T4 197 aa9.9□□□□□ -0.82
VPS13A-204ENST00000376634 Q6ZRM9 215 aa9.9□□□□□ -0.83
VPS13A-204ENST00000376634 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.83
VPS13A-204ENST00000376634 IGFBPL1Q8WX77 278 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 A0A0J9YY99 117 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 FAM231DQ6ZW35 169 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 COX7B2Q8TF08 81 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 VPREB3Q9UKI3 123 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 V9GYV3 84 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 C12orf74Q32Q52 190 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 CCL24O00175 119 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 CR1LQ2VPA4 569 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 PRR30Q53SZ7 412 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-204ENST00000376634 TIMM17AQ99595 171 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 PSMB8P28062 276 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 C5orf24Q7Z6I8 188 aa9.89□□□□□ -0.83
VPS13A-204ENST00000376634 A0A0G2JRQ6 117 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 IGHV2-70P01814 119 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 HOXB4P17483 251 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-204ENST00000376634 VOPP1Q96AW1 172 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 ADCYAP1P18509 176 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 DAZ2Q13117 558 aaKnown RBP9.88□□□□□ -0.83
VPS13A-204ENST00000376634 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
VPS13A-204ENST00000376634 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
VPS13A-204ENST00000376634 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-204ENST00000376634 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-204ENST00000376634 NPYP01303 97 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 GYPEP15421 78 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 ANKRD11Q6UB99 2663 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-204ENST00000376634 FAM236AA0A1B0GUQ0 79 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 FAM236BA0A1B0GV22 79 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 IGLL5B9A064 214 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 ICOSQ9Y6W8 199 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 NDUFS7O75251 213 aa9.88□□□□□ -0.83
VPS13A-204ENST00000376634 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 MUSTN1Q8IVN3 82 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 IGLL1P15814 213 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 AMTNQ6UX39 209 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 K7ENP7 123 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 COX7A2LO14548 114 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 CAMK2N2Q96S95 79 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 TRAV4A0A0B4J268 109 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 H3BUA1 57 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 UBE2AP49459 152 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 FXYD5Q96DB9 178 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 C9orf47Q6ZRZ4 202 aa9.87□□□□□ -0.83
VPS13A-204ENST00000376634 U3KQE9 123 aa9.86□□□□□ -0.83
VPS13A-204ENST00000376634 LTAP01374 205 aa9.86□□□□□ -0.83
VPS13A-204ENST00000376634 ELANEP08246 267 aa9.86□□□□□ -0.83
VPS13A-204ENST00000376634 CCL18P55774 89 aa9.86□□□□□ -0.83
VPS13A-204ENST00000376634 K7EQD1 137 aa9.86□□□□□ -0.83
VPS13A-204ENST00000376634 DYNAPQ8N1N2 210 aa9.86□□□□□ -0.83
VPS13A-204ENST00000376634 C17orf58Q2M2W7 97 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 BRK1Q8WUW1 75 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 NREPQ16612 68 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 NTN5Q8WTR8 489 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-204ENST00000376634 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
VPS13A-204ENST00000376634 CFC1BP0CG36 223 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 CFC1P0CG37 223 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 LMO1P25800 156 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 SEM1Q6ZVN7 128 aa9.85□□□□□ -0.83
VPS13A-204ENST00000376634 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 ZFP2Q6ZN57 461 aa9.84□□□□□ -0.83
VPS13A-204ENST00000376634 LINC00311Q8N616 119 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms