RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 COX8AP10176 69 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 SLURP1P55000 103 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 UTF1Q5T230 341 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 SIRPDQ9H106 197 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 ZNF747Q9BV97 191 aa10.59□□□□□ -0.71
C9orf47-203ENST00000375851 VWC2LB2RUY7 222 aa10.58□□□□□ -0.72
C9orf47-203ENST00000375851 GATA1P15976 413 aaPredicted RBP10.58□□□□□ -0.72
C9orf47-203ENST00000375851 SRSF2Q01130 221 aaKnown RBP10.58□□□□□ -0.72
C9orf47-203ENST00000375851 C16orf54Q6UWD8 224 aa10.58□□□□□ -0.72
C9orf47-203ENST00000375851 WI2-2373I1.2A0A1W2PRP0 233 aa10.58□□□□□ -0.72
C9orf47-203ENST00000375851 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
C9orf47-203ENST00000375851 IGF2BP2-AS1Q96M15 143 aa10.58□□□□□ -0.72
C9orf47-203ENST00000375851 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
C9orf47-203ENST00000375851 ALPK3Q96L96 1907 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 ZNF493Q6ZR52 646 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 LINC00574Q9H8X3 128 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 DKK2Q9UBU2 259 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 DSCAMO60469 2012 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 GAGE6Q13070 117 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 TRAV8-4A0A0B4J246 113 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 C2orf82Q6UX34 121 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 TLN2Q9Y4G6 2542 aa10.57□□□□□ -0.72
C9orf47-203ENST00000375851 APOC4P55056 127 aa10.56□□□□□ -0.72
C9orf47-203ENST00000375851 PRAC2D3DTV9 90 aa10.56□□□□□ -0.72
C9orf47-203ENST00000375851 SIGMAR1Q99720 223 aa10.56□□□□□ -0.72
C9orf47-203ENST00000375851 SPAG8Q99932 426 aaPredicted RBP10.56□□□□□ -0.72
C9orf47-203ENST00000375851 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
C9orf47-203ENST00000375851 KLF12Q9Y4X4 402 aa10.56□□□□□ -0.72
C9orf47-203ENST00000375851 U3KQE9 123 aa10.55□□□□□ -0.72
C9orf47-203ENST00000375851 IGHG2P01859 326 aa10.55□□□□□ -0.72
C9orf47-203ENST00000375851 NDUFA12Q9UI09 145 aa10.55□□□□□ -0.72
C9orf47-203ENST00000375851 LMO4P61968 165 aa10.55□□□□□ -0.72
C9orf47-203ENST00000375851 TRAV8-3A0A0A6YYJ7 113 aa10.55□□□□□ -0.72
C9orf47-203ENST00000375851 NUPR1O60356 82 aa10.55□□□□□ -0.72
C9orf47-203ENST00000375851 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
C9orf47-203ENST00000375851 PFN2P35080 140 aa10.54□□□□□ -0.72
C9orf47-203ENST00000375851 ANKRD11Q6UB99 2663 aaPredicted RBP10.54□□□□□ -0.72
C9orf47-203ENST00000375851 MUC22E2RYF6 1773 aaPredicted RBP10.54□□□□□ -0.72
C9orf47-203ENST00000375851 NOP10Q9NPE3 64 aaKnown RBP10.54□□□□□ -0.72
C9orf47-203ENST00000375851 PRSS29PA6NIE9 313 aa10.54□□□□□ -0.72
C9orf47-203ENST00000375851 C9JAW5 83 aa10.54□□□□□ -0.72
C9orf47-203ENST00000375851 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
C9orf47-203ENST00000375851 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
C9orf47-203ENST00000375851 PSCAO43653 123 aa10.53□□□□□ -0.72
C9orf47-203ENST00000375851 USP9XQ93008 2570 aaPredicted RBP10.53□□□□□ -0.72
C9orf47-203ENST00000375851 IGKV1D-37A0A075B6S9 117 aa10.53□□□□□ -0.72
C9orf47-203ENST00000375851 IGHV4OR15-8A0A075B7B6 117 aa10.53□□□□□ -0.72
C9orf47-203ENST00000375851 A0A087WW49 117 aa10.53□□□□□ -0.72
C9orf47-203ENST00000375851 CDPF1Q6NVV7 123 aa10.53□□□□□ -0.72
C9orf47-203ENST00000375851 J3QQQ9 107 aa10.53□□□□□ -0.72
C9orf47-203ENST00000375851 C1orf229Q6ZS94 237 aaPredicted RBP10.53□□□□□ -0.72
C9orf47-203ENST00000375851 A0A096LPF7 62 aa10.52□□□□□ -0.73
C9orf47-203ENST00000375851 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
C9orf47-203ENST00000375851 C19orf84I3L1E1 186 aa10.52□□□□□ -0.73
C9orf47-203ENST00000375851 K7EMI3 77 aa10.52□□□□□ -0.73
C9orf47-203ENST00000375851 K7EMT4 169 aa10.52□□□□□ -0.73
C9orf47-203ENST00000375851 LAMTOR3Q9UHA4 124 aa10.52□□□□□ -0.73
C9orf47-203ENST00000375851 CEP192Q8TEP8 1941 aa10.52□□□□□ -0.73
C9orf47-203ENST00000375851 PLA2G5P39877 138 aa10.51□□□□□ -0.73
C9orf47-203ENST00000375851 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
C9orf47-203ENST00000375851 RHOHQ15669 191 aa10.51□□□□□ -0.73
C9orf47-203ENST00000375851 BVES-AS1Q5T3Y7 98 aa10.51□□□□□ -0.73
C9orf47-203ENST00000375851 ADAMTSL5Q6ZMM2 481 aa10.51□□□□□ -0.73
C9orf47-203ENST00000375851 GPHB5Q86YW7 130 aa10.51□□□□□ -0.73
C9orf47-203ENST00000375851 ZNF503Q96F45 646 aa10.51□□□□□ -0.73
C9orf47-203ENST00000375851 DEFB1P60022 68 aa10.51□□□□□ -0.73
C9orf47-203ENST00000375851 C2orf70A6NJV1 201 aa10.5□□□□□ -0.73
C9orf47-203ENST00000375851 ZNF561-AS1K7EIQ3 104 aa10.5□□□□□ -0.73
C9orf47-203ENST00000375851 C9orf118A6NHY6 69 aa10.5□□□□□ -0.73
C9orf47-203ENST00000375851 UNQ9165/PRO28630Q6UXU0 137 aa10.5□□□□□ -0.73
C9orf47-203ENST00000375851 ZNF48Q96MX3 618 aaPredicted RBP10.5□□□□□ -0.73
C9orf47-203ENST00000375851 JMJD1CQ15652 2540 aa10.5□□□□□ -0.73
C9orf47-203ENST00000375851 C9orf47Q6ZRZ4 202 aa10.5□□□□□ -0.73
C9orf47-203ENST00000375851 PRORYQ9H606 182 aa10.5□□□□□ -0.73
C9orf47-203ENST00000375851 ZFYVE26Q68DK2 2539 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 USP9YO00507 2555 aaPredicted RBP10.49□□□□□ -0.73
C9orf47-203ENST00000375851 ODF3BA8MYP8 253 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 FRMD6-AS1P0C7T7 363 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 LINC00173Q6ZV60 143 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 GAGE2BQ13066 116 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 GAGE2EQ4V326 116 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 GAGE2DQ9UEU5 116 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 NXPH4O95158 308 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 TRBV12-3P01733 135 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 HERVK_113P63121 156 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 DOPEY1Q5JWR5 2465 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 A6NDX4 124 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
C9orf47-203ENST00000375851 LINC01548A6NM66 108 aa10.48□□□□□ -0.73
C9orf47-203ENST00000375851 ANGP03950 147 aaKnown RBP10.48□□□□□ -0.73
C9orf47-203ENST00000375851 EIF4EBP1Q13541 118 aaPredicted RBP10.48□□□□□ -0.73
C9orf47-203ENST00000375851 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
C9orf47-203ENST00000375851 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
C9orf47-203ENST00000375851 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
C9orf47-203ENST00000375851 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
C9orf47-203ENST00000375851 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
C9orf47-203ENST00000375851 SETD2Q9BYW2 2564 aaPredicted RBP10.48□□□□□ -0.73
C9orf47-203ENST00000375851 TRBV20-1A0A075B6N2 111 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms