RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF833PQ6ZTB9 187 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 IGHV3-21A0A0B4J1V1 117 aa9.4□□□□□ -0.9
C9orf3-203ENST00000375315 F8VRH5 84 aa9.4□□□□□ -0.9
C9orf3-203ENST00000375315 CREBBPQ92793 2442 aa9.4□□□□□ -0.9
C9orf3-203ENST00000375315 IGHG4P01861 327 aa9.4□□□□□ -0.9
C9orf3-203ENST00000375315 ACANP16112 2415 aa9.4□□□□□ -0.9
C9orf3-203ENST00000375315 NAV3Q8IVL0 2385 aa9.4□□□□□ -0.91
C9orf3-203ENST00000375315 LAGE3Q14657 143 aa9.4□□□□□ -0.91
C9orf3-203ENST00000375315 C11orf71Q6IPW1 123 aa9.4□□□□□ -0.91
C9orf3-203ENST00000375315 C17orf77Q96MU5 243 aa9.4□□□□□ -0.91
C9orf3-203ENST00000375315 FBN2P35556 2912 aa9.4□□□□□ -0.91
C9orf3-203ENST00000375315 M0QXV9 152 aa9.39□□□□□ -0.91
C9orf3-203ENST00000375315 SLC25A20O43772 301 aa9.39□□□□□ -0.91
C9orf3-203ENST00000375315 CRLF1O75462 422 aa9.39□□□□□ -0.91
C9orf3-203ENST00000375315 PRB4P10163 310 aaPredicted RBP9.39□□□□□ -0.91
C9orf3-203ENST00000375315 VMA21Q3ZAQ7 101 aa9.39□□□□□ -0.91
C9orf3-203ENST00000375315 CCL19Q99731 98 aa9.39□□□□□ -0.91
C9orf3-203ENST00000375315 ZNF815PA8K554 130 aa9.39□□□□□ -0.91
C9orf3-203ENST00000375315 TENM4Q6N022 2769 aa9.39□□□□□ -0.91
C9orf3-203ENST00000375315 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 M0R3E3 92 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 GAS8-AS1O95177 125 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 IGLC6P0CF74 106 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 IGHV1-8P0DP01 117 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 ATP5J2P56134 94 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 PRRC2AP48634 2157 aaKnown RBP9.38□□□□□ -0.91
C9orf3-203ENST00000375315 TGFAP01135 160 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 CD7P09564 240 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 EGR2P11161 476 aaPredicted RBP9.38□□□□□ -0.91
C9orf3-203ENST00000375315 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
C9orf3-203ENST00000375315 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 MSRB1Q9NZV6 116 aa9.38□□□□□ -0.91
C9orf3-203ENST00000375315 PVRIGQ6DKI7 326 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 C9JAW5 83 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 GATA1P15976 413 aaPredicted RBP9.37□□□□□ -0.91
C9orf3-203ENST00000375315 TMEM155Q4W5P6 130 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 PRADC1Q9BSG0 188 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 MDFICQ9P1T7 246 aa9.37□□□□□ -0.91
C9orf3-203ENST00000375315 UBR5O95071 2799 aaPredicted RBP9.37□□□□□ -0.91
C9orf3-203ENST00000375315 C15orf53Q8NAA6 179 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 TRAV8-4A0A0B4J246 113 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 CNTFRP26992 372 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 ZFHX3Q15911 3703 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 SETD2Q9BYW2 2564 aaPredicted RBP9.36□□□□□ -0.91
C9orf3-203ENST00000375315 RPL27AP46776 148 aaKnown RBP9.36□□□□□ -0.91
C9orf3-203ENST00000375315 EFNA4P52798 201 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 KRTAP10-9P60411 292 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 HES1Q14469 280 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 DTX2Q86UW9 622 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 RASL10AQ92737 203 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
C9orf3-203ENST00000375315 H3BRN7 92 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 IGLV2-23P01705 113 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 ORM1P02763 201 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 Q6ZQT7 251 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 COX8CQ7Z4L0 72 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 C10orf126Q8N4M7 172 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 COX6B1P14854 86 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 C5orf47Q569G3 176 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 PRR25Q96S07 402 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 SPXQ9BT56 116 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 KAAG1Q9UBP8 84 aa9.35□□□□□ -0.91
C9orf3-203ENST00000375315 PDE6HQ13956 83 aa9.34□□□□□ -0.91
C9orf3-203ENST00000375315 TPSG1Q9NRR2 321 aa9.34□□□□□ -0.91
C9orf3-203ENST00000375315 SRSF2Q01130 221 aaKnown RBP9.34□□□□□ -0.91
C9orf3-203ENST00000375315 Q8N1Y9 231 aa9.34□□□□□ -0.91
C9orf3-203ENST00000375315 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
C9orf3-203ENST00000375315 ITPR2Q14571 2701 aa9.34□□□□□ -0.91
C9orf3-203ENST00000375315 HLA-DMBP28068 263 aa9.34□□□□□ -0.92
C9orf3-203ENST00000375315 PLEKHB2Q96CS7 222 aa9.34□□□□□ -0.92
C9orf3-203ENST00000375315 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
C9orf3-203ENST00000375315 SLC25A16P16260 332 aa9.33□□□□□ -0.92
C9orf3-203ENST00000375315 PRO1854Q9UHT4 67 aa9.33□□□□□ -0.92
C9orf3-203ENST00000375315 NBPF19A0A087WUL8 3843 aa9.33□□□□□ -0.92
C9orf3-203ENST00000375315 ODF3Q96PU9 254 aa9.33□□□□□ -0.92
C9orf3-203ENST00000375315 SCGB3A1Q96QR1 104 aa9.33□□□□□ -0.92
C9orf3-203ENST00000375315 IGKV2-40A0A087WW87 121 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-203ENST00000375315 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
C9orf3-203ENST00000375315 IGKV2D-40P01614 121 aaPredicted RBP9.32□□□□□ -0.92
C9orf3-203ENST00000375315 DLX6P56179 175 aa9.32□□□□□ -0.92
C9orf3-203ENST00000375315 MRPL23Q16540 153 aaKnown RBP9.32□□□□□ -0.92
C9orf3-203ENST00000375315 IGHV4-61A0A0C4DH41 118 aa9.32□□□□□ -0.92
C9orf3-203ENST00000375315 CFC1BP0CG36 223 aa9.32□□□□□ -0.92
C9orf3-203ENST00000375315 CFC1P0CG37 223 aa9.32□□□□□ -0.92
C9orf3-203ENST00000375315 CSDC2Q9Y534 153 aaKnown RBP9.32□□□□□ -0.92
C9orf3-203ENST00000375315 MTORP42345 2549 aa9.32□□□□□ -0.92
C9orf3-203ENST00000375315 FLNBO75369 2602 aaKnown RBP9.32□□□□□ -0.92
C9orf3-203ENST00000375315 IGHV4-30-2A0A087WSY4 118 aa9.31□□□□□ -0.92
C9orf3-203ENST00000375315 DNAJC30Q96LL9 226 aa9.31□□□□□ -0.92
C9orf3-203ENST00000375315 APCP25054 2843 aa9.31□□□□□ -0.92
C9orf3-203ENST00000375315 ZNF80P51504 273 aaPredicted RBP9.31□□□□□ -0.92
C9orf3-203ENST00000375315 VMO1Q7Z5L0 202 aa9.31□□□□□ -0.92
C9orf3-203ENST00000375315 ABCA2Q9BZC7 2435 aa9.31□□□□□ -0.92
C9orf3-203ENST00000375315 MRPS12O15235 138 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms