RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 TTTY13Q9BZ97 58 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 TRIP12Q14669 1992 aaPredicted RBP5.08□□□□□ -1.6
UBR4-204ENST00000375254 IGHV7-4-1A0A0J9YVY3 117 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 IGHV1-18A0A0C4DH31 117 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 RPP25Q9BUL9 199 aaKnown RBP5.08□□□□□ -1.6
UBR4-204ENST00000375254 IGHV4-4A0A075B6R2 117 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 PRM2P04554 102 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 IGKV2D-26A0A0A0MRZ7 120 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 C8orf87E5RJ46 101 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 PRB4P10163 310 aaPredicted RBP5.08□□□□□ -1.6
UBR4-204ENST00000375254 PRR14LQ5THK1 2151 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 TMEM89A2RUT3 159 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 I3L2K1 104 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 PRYO14603 147 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 IGLV2-8P01709 118 aa5.08□□□□□ -1.6
UBR4-204ENST00000375254 CLPSP04118 112 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 Q6ZQT7 251 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 LY6EQ16553 131 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 DOPEY1Q5JWR5 2465 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 CRYGDP07320 174 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 C17orf58Q2M2W7 97 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 UBE2D4Q9Y2X8 147 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 PCNX1Q96RV3 2341 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 IGHV3-11P01762 117 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 FAM27E3Q08E93 113 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 GGNQ86UU5 652 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 ZNF581Q9P0T4 197 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 HEATR5AQ86XA9 2040 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 AKAP11Q9UKA4 1901 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 PRB3Q04118 309 aaPredicted RBP5.07□□□□□ -1.6
UBR4-204ENST00000375254 KIF20BQ96Q89 1820 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 SPAG11BQ08648 103 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 RPL39LQ96EH5 51 aaKnown RBP5.07□□□□□ -1.6
UBR4-204ENST00000375254 WFDC10AQ9H1F0 79 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 NBASA2RRP1 2371 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 GTF3C1Q12789 2109 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 MSRB1Q9NZV6 116 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.07□□□□□ -1.6
UBR4-204ENST00000375254 FRMD6-AS1P0C7T7 363 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 P0C879 139 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 LRRC37A3O60309 1634 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 PARP4Q9UKK3 1724 aaKnown RBP5.07□□□□□ -1.6
UBR4-204ENST00000375254 IGKV4-1P06312 121 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 KLK5Q9Y337 293 aaPredicted RBP5.07□□□□□ -1.6
UBR4-204ENST00000375254 ARRDC1-AS1Q9H2J1 176 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 LINC00574Q9H8X3 128 aa5.07□□□□□ -1.6
UBR4-204ENST00000375254 K7EIM0 57 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 NCR3O14931 201 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 ANGP03950 147 aaKnown RBP5.06□□□□□ -1.6
UBR4-204ENST00000375254 IGFL4Q6B9Z1 124 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 FER1L5A0AVI2 2057 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 SSC5DA1L4H1 1573 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 A0A0G2JNJ9 132 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 Q9UFV3 132 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 TTC28Q96AY4 2481 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 PATE2Q6UY27 113 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 DEFB112Q30KQ8 113 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 USF3Q68DE3 2245 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 TRBV6-5A0A0K0K1A5 114 aa5.06□□□□□ -1.6
UBR4-204ENST00000375254 DYSFO75923 2080 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 C11orf53Q8IXP5 236 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 LHBP01229 141 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 HOXB4P17483 251 aaPredicted RBP5.05□□□□□ -1.6
UBR4-204ENST00000375254 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 DEFB131AP59861 70 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 SBSPONQ8IVN8 264 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 NRXN3Q9Y4C0 1643 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 KIR2DL5BQ8NHK3 375 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 ZNFX1Q9P2E3 1918 aaKnown RBP5.05□□□□□ -1.6
UBR4-204ENST00000375254 WT1P19544 449 aaPredicted RBP5.05□□□□□ -1.6
UBR4-204ENST00000375254 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 HIVEP3Q5T1R4 2406 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 DSCAML1Q8TD84 2053 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 CTSGP08311 255 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 CHD4Q14839 1912 aa5.05□□□□□ -1.6
UBR4-204ENST00000375254 A0A1W2PRX2 142 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 ZNF22P17026 224 aaPredicted RBP5.04□□□□□ -1.6
UBR4-204ENST00000375254 ARTNQ5T4W7 220 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 C17orf77Q96MU5 243 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 TMEM254Q8TBM7 123 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 PSPHP1O15172 72 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 ERC2-IT1O76042 136 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 WDR86Q86TI4 376 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 IGHV4-28A0A0C4DH34 117 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 B3GALT5-AS1P59052 145 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 H3BPC8 53 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 SCXQ7RTU7 201 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 ZNF462Q96JM2 2506 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.04□□□□□ -1.6
UBR4-204ENST00000375254 IGKV2-29A2NJV5 120 aaPredicted RBP5.04□□□□□ -1.6
UBR4-204ENST00000375254 IGHV3-53P01767 116 aa5.04□□□□□ -1.6
UBR4-204ENST00000375254 CACNA1AO00555 2505 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 C9orf106Q8NAJ2 232 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 LINC00269Q8N2A0 174 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 DEFB130BP0DP73 79 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 DEFB130AP0DP74 79 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 TET1Q8NFU7 2136 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 K7EQD1 137 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 DEFB104AQ8WTQ1 72 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 B4DSR2 109 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms