RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 C10orf105Q8TEF2 133 aa8.44□□□□□ -1.06
CCDC40-203ENST00000374877 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
CCDC40-203ENST00000374877 ATP5J2P56134 94 aa8.44□□□□□ -1.06
CCDC40-203ENST00000374877 C1orf122Q6ZSJ8 110 aa8.44□□□□□ -1.06
CCDC40-203ENST00000374877 DEFB104AQ8WTQ1 72 aa8.44□□□□□ -1.06
CCDC40-203ENST00000374877 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 NEXN-AS1Q8NBZ9 246 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 TOMM6Q96B49 74 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 BPESC1Q9GZL8 116 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 ASH1LQ9NR48 2969 aaKnown RBP8.43□□□□□ -1.06
CCDC40-203ENST00000374877 FAM208BQ5VWN6 2430 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 C9orf47Q6ZRZ4 202 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 RASL10AQ92737 203 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 IGHV4-4A0A075B6R2 117 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 LINC01548A6NM66 108 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 SLC25A16P16260 332 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 PSMB2P49721 201 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 LMO4P61968 165 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 EBI3Q14213 229 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 ZNF418Q8TF45 676 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-203ENST00000374877 BAALCQ8WXS3 180 aa8.43□□□□□ -1.06
CCDC40-203ENST00000374877 PRSS29PA6NIE9 313 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 AKAP6Q13023 2319 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 EEF1AKMT3Q96AZ1 226 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 PLEKHB2Q96CS7 222 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 BEX4Q9NWD9 120 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-203ENST00000374877 PHLDA3Q9Y5J5 127 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 TMEM238LA0A1B0GVL6 79 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 A6NJY4 79 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 OOSP1A8MZH6 123 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 EMP1P54849 157 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 DEFB1P60022 68 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 CKS1BP61024 79 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 MINOS1Q5TGZ0 78 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 KLHL30-AS1Q8NEE0 82 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 DLX4Q92988 240 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-203ENST00000374877 MINOS1-NBL1R4GNA1 71 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 HRNRQ86YZ3 2850 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-203ENST00000374877 WFDC12Q8WWY7 111 aa8.42□□□□□ -1.06
CCDC40-203ENST00000374877 LINC01619G3V211 115 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 ZFP36P26651 326 aaKnown RBP8.41□□□□□ -1.06
CCDC40-203ENST00000374877 FOXI1Q12951 378 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 Q5PR19 223 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 LRRC75A-AS1Q8N1F1 130 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 MRPL53Q96EL3 112 aaKnown RBP8.41□□□□□ -1.06
CCDC40-203ENST00000374877 DPH3P1Q9H4G8 78 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 C1QTNF4Q9BXJ3 329 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 MYO18BQ8IUG5 2567 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 ZFP2Q6ZN57 461 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 C20orf173Q96LM9 149 aa8.41□□□□□ -1.06
CCDC40-203ENST00000374877 ASIPP42127 132 aa8.4□□□□□ -1.06
CCDC40-203ENST00000374877 PTH2Q96A98 100 aa8.4□□□□□ -1.06
CCDC40-203ENST00000374877 LINC00527Q9UJ94 153 aa8.4□□□□□ -1.06
CCDC40-203ENST00000374877 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
CCDC40-203ENST00000374877 CFAP126Q5VTH2 177 aa8.4□□□□□ -1.06
CCDC40-203ENST00000374877 TSPAN13O95857 204 aa8.4□□□□□ -1.07
CCDC40-203ENST00000374877 TGFAP01135 160 aa8.4□□□□□ -1.07
CCDC40-203ENST00000374877 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.07
CCDC40-203ENST00000374877 GLMPQ8WWB7 406 aa8.4□□□□□ -1.07
CCDC40-203ENST00000374877 FLNCQ14315 2725 aa8.39□□□□□ -1.07
CCDC40-203ENST00000374877 IGKV3-7A0A075B6H7 116 aa8.39□□□□□ -1.07
CCDC40-203ENST00000374877 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
CCDC40-203ENST00000374877 DUSP14O95147 198 aaKnown RBP8.39□□□□□ -1.07
CCDC40-203ENST00000374877 RPL11P62913 178 aaKnown RBP8.39□□□□□ -1.07
CCDC40-203ENST00000374877 NFE4Q86UQ8 179 aa8.39□□□□□ -1.07
CCDC40-203ENST00000374877 OR10J6PQ8NGY7 276 aa8.39□□□□□ -1.07
CCDC40-203ENST00000374877 CLUHP3Q96NS8 147 aa8.39□□□□□ -1.07
CCDC40-203ENST00000374877 TRBV7-1A0A0A6YYK4 115 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
CCDC40-203ENST00000374877 C9orf139Q6ZV77 190 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 ZFAND2AQ8N6M9 145 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 NRGNQ92686 78 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 SIRPDQ9H106 197 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 IGHV4-30-2A0A087WSY4 118 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 IGHV4-61A0A0C4DH41 118 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 SAA4P35542 130 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 C11orf86A6NJI1 115 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 GNRH2O43555 120 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 SPINK8P0C7L1 97 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 ARL3P36405 182 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 UBE2D1P51668 147 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 DEFB113Q30KQ7 82 aa8.38□□□□□ -1.07
CCDC40-203ENST00000374877 F6UB75 175 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 TMEM219Q86XT9 240 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 KRTAP10-9P60411 292 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 HERVK_113P61574 105 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 LINC00477Q96M19 166 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 TP53TG1Q9Y2A0 90 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 U3KQE9 123 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 RNF223E7ERA6 249 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 TCTEX1D4Q5JR98 221 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 CDIP1Q9H305 208 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 LENEPQ9Y5L5 61 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 CHD6Q8TD26 2715 aa8.37□□□□□ -1.07
CCDC40-203ENST00000374877 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 GEMIN7Q9H840 131 aaKnown RBP8.36□□□□□ -1.07
CCDC40-203ENST00000374877 MT-ATP8P03928 68 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 TMEM170BQ5T4T1 132 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 LYRM7Q5U5X0 104 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms