RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 HOXA5P20719 270 aa11.46□□□□□ -0.58
NIPAL3-204ENST00000374399 LINC00310P59036 64 aa11.46□□□□□ -0.58
NIPAL3-204ENST00000374399 DEFB125Q8N687 156 aa11.46□□□□□ -0.58
NIPAL3-204ENST00000374399 ALKBH7Q9BT30 221 aaPredicted RBP11.46□□□□□ -0.58
NIPAL3-204ENST00000374399 MCRIP2Q9BUT9 160 aaKnown RBP11.46□□□□□ -0.58
NIPAL3-204ENST00000374399 IFITM10A6NMD0 228 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 UBE2CO00762 179 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 S100A8P05109 93 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 SRIP30626 198 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 DMRTA1Q5VZB9 504 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 FAM104BQ5XKR9 115 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 C9orf85Q96MD7 179 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-204ENST00000374399 DNAH3Q8TD57 4116 aa11.44□□□□□ -0.58
NIPAL3-204ENST00000374399 NXPH4O95158 308 aa11.44□□□□□ -0.58
NIPAL3-204ENST00000374399 AMN1Q8IY45 258 aa11.44□□□□□ -0.58
NIPAL3-204ENST00000374399 C1orf158Q8N1D5 194 aa11.44□□□□□ -0.58
NIPAL3-204ENST00000374399 RNF185Q96GF1 192 aa11.44□□□□□ -0.58
NIPAL3-204ENST00000374399 NUPR1O60356 82 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 S100A4P26447 101 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 CACNG7P62955 275 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 Q0VG73 95 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 INSP01308 110 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 AMBPP02760 352 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 EVI2AP22794 236 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 TMEM256Q8N2U0 113 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 C20orf144Q9BQM9 153 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 LINC00467Q9BRT7 94 aa11.43□□□□□ -0.58
NIPAL3-204ENST00000374399 MRPL51Q4U2R6 128 aaKnown RBP11.42□□□□□ -0.58
NIPAL3-204ENST00000374399 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
NIPAL3-204ENST00000374399 HIST3H2BBQ8N257 126 aa11.42□□□□□ -0.58
NIPAL3-204ENST00000374399 CSNK1G2-AS1Q8NCQ2 148 aa11.42□□□□□ -0.58
NIPAL3-204ENST00000374399 C18orf32Q8TCD1 76 aa11.42□□□□□ -0.58
NIPAL3-204ENST00000374399 PHLDA3Q9Y5J5 127 aa11.42□□□□□ -0.58
NIPAL3-204ENST00000374399 M0R381 172 aa11.41□□□□□ -0.58
NIPAL3-204ENST00000374399 RAB4AP20338 218 aa11.41□□□□□ -0.58
NIPAL3-204ENST00000374399 IQCJQ1A5X6 159 aa11.41□□□□□ -0.58
NIPAL3-204ENST00000374399 U3KQK5 164 aa11.41□□□□□ -0.58
NIPAL3-204ENST00000374399 GAS8-AS1O95177 125 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 OR10J3Q5JRS4 329 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 GTSCR1Q86UQ5 136 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 RCHY1Q96PM5 261 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 CBY3A6NI87 242 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 LINC01587Q99440 93 aa11.4□□□□□ -0.58
NIPAL3-204ENST00000374399 AZU1P20160 251 aa11.39□□□□□ -0.59
NIPAL3-204ENST00000374399 PDZD11Q5EBL8 140 aa11.39□□□□□ -0.59
NIPAL3-204ENST00000374399 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
NIPAL3-204ENST00000374399 KIF25-AS1Q9Y6Z4 181 aa11.39□□□□□ -0.59
NIPAL3-204ENST00000374399 D6R8Y8 96 aa11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 SMKR1H3BMG3 65 aa11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 HTN1P15515 57 aa11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 JPT2Q9H910 190 aa11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 SERF1AO75920 110 aa11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 ESDP10768 282 aa11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 LINC00315P59091 139 aa11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 MORN3Q6PF18 240 aaPredicted RBP11.38□□□□□ -0.59
NIPAL3-204ENST00000374399 KRTAP10-11P60412 298 aa11.37□□□□□ -0.59
NIPAL3-204ENST00000374399 C14orf178Q8N769 122 aaPredicted RBP11.37□□□□□ -0.59
NIPAL3-204ENST00000374399 NCR2O95944 276 aa11.36□□□□□ -0.59
NIPAL3-204ENST00000374399 MDFIQ99750 246 aa11.36□□□□□ -0.59
NIPAL3-204ENST00000374399 GSN-AS1Q9NRJ2 163 aa11.36□□□□□ -0.59
NIPAL3-204ENST00000374399 GATA1P15976 413 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 EGFEM1PQ0D2K5 195 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 ZNF705AQ6ZN79 300 aaPredicted RBP11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 BAGE3Q86Y29 109 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 IL17DQ8TAD2 202 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 NACAE9PAV3 2078 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 NPYP01303 97 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 RNASE8Q8TDE3 154 aaKnown RBP11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 CSTL1Q9H114 145 aa11.35□□□□□ -0.59
NIPAL3-204ENST00000374399 TRAV26-2A0A0B4J265 109 aa11.34□□□□□ -0.59
NIPAL3-204ENST00000374399 CKS2P33552 79 aa11.34□□□□□ -0.59
NIPAL3-204ENST00000374399 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
NIPAL3-204ENST00000374399 TMEM208Q9BTX3 173 aa11.34□□□□□ -0.59
NIPAL3-204ENST00000374399 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
NIPAL3-204ENST00000374399 SAMD10Q9BYL1 202 aa11.34□□□□□ -0.59
NIPAL3-204ENST00000374399 DPH3P1Q9H4G8 78 aa11.34□□□□□ -0.59
NIPAL3-204ENST00000374399 PLAC8L1A1L4L8 177 aa11.33□□□□□ -0.6
NIPAL3-204ENST00000374399 CRYGDP07320 174 aa11.33□□□□□ -0.6
NIPAL3-204ENST00000374399 ZNF415Q09FC8 603 aa11.33□□□□□ -0.6
NIPAL3-204ENST00000374399 SMIM15Q7Z3B0 74 aa11.33□□□□□ -0.6
NIPAL3-204ENST00000374399 NRACQ8N912 160 aa11.33□□□□□ -0.6
NIPAL3-204ENST00000374399 ZNF876PQ49A33 203 aa11.32□□□□□ -0.6
NIPAL3-204ENST00000374399 NIT1Q86X76 327 aa11.32□□□□□ -0.6
NIPAL3-204ENST00000374399 PTH2Q96A98 100 aa11.32□□□□□ -0.6
NIPAL3-204ENST00000374399 NBEAL2Q6ZNJ1 2754 aa11.32□□□□□ -0.6
NIPAL3-204ENST00000374399 A0A087WWL8 130 aa11.32□□□□□ -0.6
NIPAL3-204ENST00000374399 PPBPP02775 128 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms