RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 BUB3O43684 328 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 NCR2O95944 276 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 ATP5G2Q06055 141 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 CLEC19AQ6UXS0 136 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 C8orf49Q96NF6 230 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 VGLL1Q99990 258 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
HMGA1-203ENST00000374116 IGHV3-35A0A0C4DH35 117 aa10.85□□□□□ -0.67
HMGA1-203ENST00000374116 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
HMGA1-203ENST00000374116 SMIM13P0DJ93 91 aa10.85□□□□□ -0.67
HMGA1-203ENST00000374116 PF4V1P10720 104 aa10.85□□□□□ -0.67
HMGA1-203ENST00000374116 SMAGPQ0VAQ4 97 aa10.85□□□□□ -0.67
HMGA1-203ENST00000374116 NSUN5P1Q3KNT7 163 aa10.85□□□□□ -0.67
HMGA1-203ENST00000374116 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
HMGA1-203ENST00000374116 ASCL2Q99929 193 aa10.85□□□□□ -0.67
HMGA1-203ENST00000374116 IGKV2-40A0A087WW87 121 aaPredicted RBP10.84□□□□□ -0.67
HMGA1-203ENST00000374116 FAM223BA6NKX1 122 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 IGKV2D-40P01614 121 aaPredicted RBP10.84□□□□□ -0.67
HMGA1-203ENST00000374116 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
HMGA1-203ENST00000374116 FAM223AQ8IWN6 122 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 PRR25Q96S07 402 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 CITED1Q99966 193 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 MCRIP2Q9BUT9 160 aaKnown RBP10.84□□□□□ -0.67
HMGA1-203ENST00000374116 TSSC4Q9Y5U2 329 aaPredicted RBP10.84□□□□□ -0.67
HMGA1-203ENST00000374116 IGHV3OR16-8A0A075B7F1 116 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 IGHG4P01861 327 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 PSMB8P28062 276 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 SLC50A1Q9BRV3 221 aa10.84□□□□□ -0.67
HMGA1-203ENST00000374116 DNHD1Q96M86 4753 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 A0A096LNJ9 63 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 SNAI2O43623 268 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 SH2D1AO60880 128 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 IGLV1-40P01703 118 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 ARMS2P0C7Q2 107 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 CKS1BP61024 79 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 PHLDA1Q8WV24 401 aaPredicted RBP10.83□□□□□ -0.68
HMGA1-203ENST00000374116 METTL26Q96S19 204 aa10.83□□□□□ -0.68
HMGA1-203ENST00000374116 IGHV3-11P01762 117 aa10.82□□□□□ -0.68
HMGA1-203ENST00000374116 PRB4P10163 310 aaPredicted RBP10.82□□□□□ -0.68
HMGA1-203ENST00000374116 HLA-DRB4P13762 266 aa10.82□□□□□ -0.68
HMGA1-203ENST00000374116 DUX3Q96PT4 197 aa10.82□□□□□ -0.68
HMGA1-203ENST00000374116 HLA-DRB4X5D2U9 266 aa10.82□□□□□ -0.68
HMGA1-203ENST00000374116 ANK2Q01484 3957 aa10.82□□□□□ -0.68
HMGA1-203ENST00000374116 RBAKDNA6NC62 111 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 A6NJY4 79 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 H0Y8G0 127 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 TRGV3P03979 118 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 ZNF138P52744 262 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 DEFB136Q30KP8 78 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 NAA38Q9BRA0 125 aaKnown RBP10.81□□□□□ -0.68
HMGA1-203ENST00000374116 U3KQK5 164 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 ADARB2-AS1A8MUL3 147 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 E9PLD3 99 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 H3BUA1 57 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 IGFL4Q6B9Z1 124 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 RAB37Q96AX2 223 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 ZNF580Q9UK33 172 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 U3KQE9 123 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 WNK1Q9H4A3 2382 aa10.81□□□□□ -0.68
HMGA1-203ENST00000374116 VWFP04275 2813 aa10.8□□□□□ -0.68
HMGA1-203ENST00000374116 HLA-DMBP28068 263 aa10.8□□□□□ -0.68
HMGA1-203ENST00000374116 TM2D2Q9BX73 214 aa10.8□□□□□ -0.68
HMGA1-203ENST00000374116 ELANEP08246 267 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 PRR31Q5SQ13 230 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 C8orf86Q6ZUL3 223 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 KLHL30-AS1Q8NEE0 82 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 MRPL53Q96EL3 112 aaKnown RBP10.79□□□□□ -0.68
HMGA1-203ENST00000374116 TRAV26-1A0A087WT03 109 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 SHISA2Q6UWI4 295 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 LYZL1Q6UWQ5 148 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 PRSS3P2Q8NHM4 247 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 Q8TAT8 98 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 TPPP3Q9BW30 176 aa10.79□□□□□ -0.68
HMGA1-203ENST00000374116 ARL3P36405 182 aa10.78□□□□□ -0.68
HMGA1-203ENST00000374116 CRYBA4P53673 196 aa10.78□□□□□ -0.68
HMGA1-203ENST00000374116 USMG5Q96IX5 58 aa10.78□□□□□ -0.68
HMGA1-203ENST00000374116 TMSB15BA0A087X1C1 80 aa10.77□□□□□ -0.68
HMGA1-203ENST00000374116 IGHV3-66A0A0C4DH42 116 aa10.77□□□□□ -0.68
HMGA1-203ENST00000374116 FABP5P3A8MUU1 101 aa10.77□□□□□ -0.68
HMGA1-203ENST00000374116 HBDP02042 147 aa10.77□□□□□ -0.68
HMGA1-203ENST00000374116 CSN3P07498 182 aa10.77□□□□□ -0.68
HMGA1-203ENST00000374116 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.68
HMGA1-203ENST00000374116 CACNG7P62955 275 aa10.77□□□□□ -0.68
HMGA1-203ENST00000374116 RNF152Q8N8N0 203 aa10.77□□□□□ -0.68
HMGA1-203ENST00000374116 SPAG8Q99932 426 aaPredicted RBP10.77□□□□□ -0.68
HMGA1-203ENST00000374116 MRPL16Q9NX20 251 aaKnown RBP10.77□□□□□ -0.68
HMGA1-203ENST00000374116 PRAC2D3DTV9 90 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 TSPAN13O95857 204 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 FXYD2P54710 66 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 TAL2Q16559 108 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 LINC01559Q495D7 138 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 OR8A1Q8NGG7 326 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 ATP6V0E2Q8NHE4 81 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 MYOZ3Q8TDC0 251 aa10.77□□□□□ -0.69
HMGA1-203ENST00000374116 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms