RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 PCP2Q8IVA1 136 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 YAE1D1Q9NRH1 226 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 SPRY2O43597 315 aa13.09□□□□□ -0.31
VEGFA-205ENST00000372067 CHCHD1Q96BP2 118 aaKnown RBP13.09□□□□□ -0.31
VEGFA-205ENST00000372067 PPDPFQ9H3Y8 114 aa13.08□□□□□ -0.32
VEGFA-205ENST00000372067 CYSLTR1Q9Y271 337 aa13.08□□□□□ -0.32
VEGFA-205ENST00000372067 CCDC179H3BU77 68 aa13.08□□□□□ -0.32
VEGFA-205ENST00000372067 PIFOQ8TCI5 191 aa13.08□□□□□ -0.32
VEGFA-205ENST00000372067 NFE4Q86UQ8 179 aa13.08□□□□□ -0.32
VEGFA-205ENST00000372067 A0A087WX48 190 aa13.07□□□□□ -0.32
VEGFA-205ENST00000372067 TRBV6-1A0A0K0K1D8 114 aa13.07□□□□□ -0.32
VEGFA-205ENST00000372067 SMAD7O15105 426 aaKnown RBP13.07□□□□□ -0.32
VEGFA-205ENST00000372067 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
VEGFA-205ENST00000372067 RHPN1-AS1Q9BWJ2 59 aa13.07□□□□□ -0.32
VEGFA-205ENST00000372067 F6UB75 175 aa13.07□□□□□ -0.32
VEGFA-205ENST00000372067 CLPSL1A2RUU4 121 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 M0R381 172 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 SMIM13P0DJ93 91 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 FAM106AQ4KMX7 169 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 MRPL51Q4U2R6 128 aaKnown RBP13.06□□□□□ -0.32
VEGFA-205ENST00000372067 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 H3BVH4 76 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 M0QXV9 152 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 RNASE4P34096 147 aaKnown RBP13.06□□□□□ -0.32
VEGFA-205ENST00000372067 SETD2Q9BYW2 2564 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-205ENST00000372067 SVEP1Q4LDE5 3571 aa13.06□□□□□ -0.32
VEGFA-205ENST00000372067 USMG5Q96IX5 58 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 A6NDX4 124 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 PRSS29PA6NIE9 313 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 SLC25A16P16260 332 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 DSCR9P59020 149 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 BEX4Q9NWD9 120 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-205ENST00000372067 DPF1Q92782 380 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 BBC3Q96PG8 261 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-205ENST00000372067 SIGLEC8Q9NYZ4 499 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 VPREB3Q9UKI3 123 aa13.05□□□□□ -0.32
VEGFA-205ENST00000372067 FOXI1Q12951 378 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 IGHG2P01859 326 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 TMEM190Q8WZ59 177 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 E9PLD3 99 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 MGPP08493 103 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 C9orf139Q6ZV77 190 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 MAP1LC3AQ9H492 121 aa13.04□□□□□ -0.32
VEGFA-205ENST00000372067 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
VEGFA-205ENST00000372067 GCSHP23434 173 aa13.03□□□□□ -0.32
VEGFA-205ENST00000372067 TTTY13Q9BZ97 58 aa13.03□□□□□ -0.32
VEGFA-205ENST00000372067 NDUFA4O00483 81 aa13.03□□□□□ -0.32
VEGFA-205ENST00000372067 IGHG4P01861 327 aa13.03□□□□□ -0.32
VEGFA-205ENST00000372067 ZNF747Q9BV97 191 aa13.03□□□□□ -0.32
VEGFA-205ENST00000372067 NOTCH2Q04721 2471 aa13.03□□□□□ -0.32
VEGFA-205ENST00000372067 NPYP01303 97 aa13.02□□□□□ -0.32
VEGFA-205ENST00000372067 Q6ZQT7 251 aa13.02□□□□□ -0.32
VEGFA-205ENST00000372067 USP24Q9UPU5 2620 aa13.02□□□□□ -0.32
VEGFA-205ENST00000372067 IGF1P05019 195 aa13.02□□□□□ -0.33
VEGFA-205ENST00000372067 APOMO95445 188 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 PRSS1P07477 247 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-205ENST00000372067 RAX2Q96IS3 184 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 TRAV8-2A0A0B4J237 113 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 SMCPP49901 116 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-205ENST00000372067 OR9G4Q8NGQ1 327 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 WNK1Q9H4A3 2382 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 LOXL1Q08397 574 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-205ENST00000372067 KIR2DL4Q99706 377 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 PHLDA3Q9Y5J5 127 aa13.01□□□□□ -0.33
VEGFA-205ENST00000372067 ZNF688P0C7X2 276 aa13□□□□□ -0.33
VEGFA-205ENST00000372067 HTN1P15515 57 aa13□□□□□ -0.33
VEGFA-205ENST00000372067 GAGE13Q4V321 117 aa13□□□□□ -0.33
VEGFA-205ENST00000372067 DAZ1Q9NQZ3 744 aaKnown RBP13□□□□□ -0.33
VEGFA-205ENST00000372067 NHP2Q9NX24 153 aaKnown RBP13□□□□□ -0.33
VEGFA-205ENST00000372067 IGLL5B9A064 214 aa13□□□□□ -0.33
VEGFA-205ENST00000372067 KRTAP10-9P60411 292 aa13□□□□□ -0.33
VEGFA-205ENST00000372067 C20orf173Q96LM9 149 aa13□□□□□ -0.33
VEGFA-205ENST00000372067 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
VEGFA-205ENST00000372067 TRBV20-1A0A075B6N2 111 aa12.99□□□□□ -0.33
VEGFA-205ENST00000372067 TRAV26-2A0A0B4J265 109 aa12.99□□□□□ -0.33
VEGFA-205ENST00000372067 A0A1B0GWB2 263 aa12.99□□□□□ -0.33
VEGFA-205ENST00000372067 NMUP48645 174 aa12.99□□□□□ -0.33
VEGFA-205ENST00000372067 CACNG7P62955 275 aa12.99□□□□□ -0.33
VEGFA-205ENST00000372067 DEFB104AQ8WTQ1 72 aa12.99□□□□□ -0.33
VEGFA-205ENST00000372067 CRYBG3Q68DQ2 2970 aa12.98□□□□□ -0.33
VEGFA-205ENST00000372067 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
VEGFA-205ENST00000372067 A0A096LNJ9 63 aa12.98□□□□□ -0.33
VEGFA-205ENST00000372067 EDN2P20800 178 aa12.98□□□□□ -0.33
VEGFA-205ENST00000372067 IGKV3D-20A0A0C4DH25 116 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 OVOL1O14753 267 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 Q96MF0 132 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 IGHV7-4-1A0A0J9YVY3 117 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 F5H697 171 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 LEPP41159 167 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 PSMG4Q5JS54 123 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 ZNF843Q8N446 348 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 C11orf21Q9P2W6 132 aa12.97□□□□□ -0.33
VEGFA-205ENST00000372067 TRAV21A0A0B4J279 112 aa12.96□□□□□ -0.33
VEGFA-205ENST00000372067 HBDP02042 147 aa12.96□□□□□ -0.33
VEGFA-205ENST00000372067 ASIPP42127 132 aa12.96□□□□□ -0.33
VEGFA-205ENST00000372067 IGKV2D-26A0A0A0MRZ7 120 aa12.96□□□□□ -0.33
VEGFA-205ENST00000372067 LINC00477Q96M19 166 aa12.96□□□□□ -0.33
VEGFA-205ENST00000372067 RBAKDNA6NC62 111 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms