RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 A0A087X0K7 114 aa11.42□□□□□ -0.58
NDC1-201ENST00000371429 TRAV25A0A0B4J276 109 aa11.42□□□□□ -0.58
NDC1-201ENST00000371429 IGHV4-31P0DP07 118 aa11.42□□□□□ -0.58
NDC1-201ENST00000371429 C20orf78Q9BR46 151 aa11.42□□□□□ -0.58
NDC1-201ENST00000371429 CCL18P55774 89 aa11.42□□□□□ -0.58
NDC1-201ENST00000371429 COL4A4P53420 1690 aaPredicted RBP11.42□□□□□ -0.58
NDC1-201ENST00000371429 CEP295Q9C0D2 2601 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 H3BMM0 161 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 UBE2WQ96B02 151 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 MRPL23Q16540 153 aaKnown RBP11.41□□□□□ -0.58
NDC1-201ENST00000371429 ADAMTSL5Q6ZMM2 481 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 INAFM1C9JVW0 142 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 SPRY2O43597 315 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
NDC1-201ENST00000371429 SIGLEC8Q9NYZ4 499 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 NACAE9PAV3 2078 aa11.41□□□□□ -0.58
NDC1-201ENST00000371429 PATE2Q6UY27 113 aa11.4□□□□□ -0.58
NDC1-201ENST00000371429 INSL3P51460 131 aa11.4□□□□□ -0.58
NDC1-201ENST00000371429 Q6ZQT7 251 aa11.4□□□□□ -0.58
NDC1-201ENST00000371429 DENND4AQ7Z401 1863 aa11.4□□□□□ -0.58
NDC1-201ENST00000371429 LOC105371267A0A1B0GV96 52 aa11.4□□□□□ -0.59
NDC1-201ENST00000371429 DEFB135Q30KP9 77 aa11.4□□□□□ -0.59
NDC1-201ENST00000371429 GYPEP15421 78 aa11.39□□□□□ -0.59
NDC1-201ENST00000371429 CD5LO43866 347 aa11.39□□□□□ -0.59
NDC1-201ENST00000371429 C1orf43Q9BWL3 253 aa11.39□□□□□ -0.59
NDC1-201ENST00000371429 TMEM61Q8N0U2 210 aa11.39□□□□□ -0.59
NDC1-201ENST00000371429 ICOSQ9Y6W8 199 aa11.39□□□□□ -0.59
NDC1-201ENST00000371429 RNASE13Q5GAN3 156 aaKnown RBP11.39□□□□□ -0.59
NDC1-201ENST00000371429 OVOL2Q9BRP0 275 aa11.39□□□□□ -0.59
NDC1-201ENST00000371429 XCL1P47992 114 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 HERVK_113P63121 156 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 ESM1Q9NQ30 184 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 NDUFA12Q9UI09 145 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 ZFYVE26Q68DK2 2539 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 E7EUB6 86 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 KLF12Q9Y4X4 402 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 MORN5Q5VZ52 161 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 TMEM131Q92545 1883 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 MED12LQ86YW9 2145 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 MEGF9Q9H1U4 602 aa11.38□□□□□ -0.59
NDC1-201ENST00000371429 ATP6V0E2Q8NHE4 81 aa11.37□□□□□ -0.59
NDC1-201ENST00000371429 OBSL1O75147 1896 aa11.37□□□□□ -0.59
NDC1-201ENST00000371429 WI2-2373I1.2A0A1W2PRP0 233 aa11.37□□□□□ -0.59
NDC1-201ENST00000371429 ODF3BA8MYP8 253 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 CRLF1O75462 422 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 K7EN84 100 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 TRBV12-3P01733 135 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 Q6YL49 198 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 SH2D6Q7Z4S9 175 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 FANCD2OSQ96PS1 177 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.36□□□□□ -0.59
NDC1-201ENST00000371429 IGKV2-29A2NJV5 120 aaPredicted RBP11.36□□□□□ -0.59
NDC1-201ENST00000371429 UNQ9165/PRO28630Q6UXU0 137 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 TMEM126AQ9H061 195 aa11.36□□□□□ -0.59
NDC1-201ENST00000371429 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
NDC1-201ENST00000371429 CHD3Q12873 2000 aaKnown RBP11.35□□□□□ -0.59
NDC1-201ENST00000371429 PYY3Q5JQD4 70 aa11.35□□□□□ -0.59
NDC1-201ENST00000371429 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
NDC1-201ENST00000371429 DNAJC30Q96LL9 226 aa11.35□□□□□ -0.59
NDC1-201ENST00000371429 TRAV8-4A0A0B4J246 113 aa11.35□□□□□ -0.59
NDC1-201ENST00000371429 F8VRH5 84 aa11.35□□□□□ -0.59
NDC1-201ENST00000371429 SNHG12Q9BXW3 62 aa11.35□□□□□ -0.59
NDC1-201ENST00000371429 DEFB4AO15263 64 aa11.34□□□□□ -0.59
NDC1-201ENST00000371429 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
NDC1-201ENST00000371429 MRPL36Q9P0J6 103 aaKnown RBP11.34□□□□□ -0.59
NDC1-201ENST00000371429 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
NDC1-201ENST00000371429 IGHG4P01861 327 aa11.34□□□□□ -0.59
NDC1-201ENST00000371429 ZNF48Q96MX3 618 aaPredicted RBP11.34□□□□□ -0.59
NDC1-201ENST00000371429 PRRC2AP48634 2157 aaKnown RBP11.34□□□□□ -0.59
NDC1-201ENST00000371429 C21orf62-AS1Q17RA5 79 aa11.34□□□□□ -0.59
NDC1-201ENST00000371429 WDR87Q6ZQQ6 2873 aa11.34□□□□□ -0.59
NDC1-201ENST00000371429 NDUFA11Q86Y39 141 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 Q8N1Y9 231 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 K7EQD1 137 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 FSTL3O95633 263 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 SPINK8P0C7L1 97 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 UBE2BP63146 152 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 KIR3DS1Q14943 382 aa11.33□□□□□ -0.6
NDC1-201ENST00000371429 F8W735 103 aaPredicted RBP11.32□□□□□ -0.6
NDC1-201ENST00000371429 LINC00574Q9H8X3 128 aa11.32□□□□□ -0.6
NDC1-201ENST00000371429 DEFB1P60022 68 aa11.32□□□□□ -0.6
NDC1-201ENST00000371429 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
NDC1-201ENST00000371429 ANKRD11Q6UB99 2663 aaPredicted RBP11.32□□□□□ -0.6
NDC1-201ENST00000371429 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
NDC1-201ENST00000371429 C2CD3Q4AC94 2353 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 SRCAPQ6ZRS2 3230 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 IGHV3-30P01768 117 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 IGHV3-33P01772 117 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 IGHV3-30-3P0DP02 117 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 IGHV3-30-5P0DP03 117 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 LGALS9CQ6DKI2 356 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 C11orf71Q6IPW1 123 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 C9orf47Q6ZRZ4 202 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 C5orf38Q86SI9 138 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 KLK5Q9Y337 293 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms