RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 Q6Q795 121 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 FAM223AQ8IWN6 122 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 C17orf77Q96MU5 243 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 C15orf62A8K5M9 175 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 FABP2P12104 132 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 NTF3P20783 257 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 PPIFP30405 207 aaKnown RBP5.35□□□□□ -1.55
USP1-202ENST00000371146 TIRAPP58753 221 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 CCL20P78556 96 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 MIR17HGQ75NE6 70 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 Q8TAT8 98 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 C4orf3Q8WVX3 66 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 TMEM101Q96IK0 257 aa5.35□□□□□ -1.55
USP1-202ENST00000371146 NAA38Q9BRA0 125 aaKnown RBP5.35□□□□□ -1.55
USP1-202ENST00000371146 A0A096LPF7 62 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 C3orf79P0CE67 100 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 Q6ZS49 121 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 BPIFA4PQ86YQ2 179 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 DUXBA0A1W2PPF3 345 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 K7EN84 100 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 NDUFA7O95182 113 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 IGF1P05019 195 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 CSN3P07498 182 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 CRISP2P16562 243 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 RRN3P1Q2M238 152 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 Q8N6K4 173 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 SRSF8Q9BRL6 282 aaKnown RBP5.34□□□□□ -1.55
USP1-202ENST00000371146 C1orf43Q9BWL3 253 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 MRPL32Q9BYC8 188 aaKnown RBP5.34□□□□□ -1.55
USP1-202ENST00000371146 LINC00574Q9H8X3 128 aa5.34□□□□□ -1.55
USP1-202ENST00000371146 IGLV11-55A0A075B6I3 123 aa5.34□□□□□ -1.56
USP1-202ENST00000371146 TRAV9-1A0A075B6T8 112 aa5.34□□□□□ -1.56
USP1-202ENST00000371146 C9JAW5 83 aa5.34□□□□□ -1.56
USP1-202ENST00000371146 SPINK4O60575 86 aa5.34□□□□□ -1.56
USP1-202ENST00000371146 PRNTQ86SH4 94 aa5.34□□□□□ -1.56
USP1-202ENST00000371146 PAXXQ9BUH6 204 aa5.34□□□□□ -1.56
USP1-202ENST00000371146 MDFICQ9P1T7 246 aa5.34□□□□□ -1.56
USP1-202ENST00000371146 TRAV12-3A0A0B4J271 114 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 TINCRA0A1B0GVN0 87 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 H3BUT2 72 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 RNASE4P34096 147 aaKnown RBP5.33□□□□□ -1.56
USP1-202ENST00000371146 XGP55808 180 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 GNG5P63218 68 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 GOLT1AQ6ZVE7 132 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 SPATA12Q7Z6I5 190 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 ZNF502Q8TBZ5 544 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 ATP5SQ99766 215 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 VGLL1Q99990 258 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 TRAV8-1A0A0A6YYK1 113 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 IGHV3-73A0A0B4J1V6 119 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 ISLRO14498 428 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 IGKV1-17P01599 117 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 UBE2G1P62253 170 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 ERCC8Q13216 396 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 EBI3Q14213 229 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 OR10J3Q5JRS4 329 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 MEIG1Q5JSS6 88 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 OR10J6PQ8NGY7 276 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 KLK9Q9UKQ9 250 aa5.33□□□□□ -1.56
USP1-202ENST00000371146 IGKV2-40A0A087WW87 121 aaPredicted RBP5.32□□□□□ -1.56
USP1-202ENST00000371146 A0A0U1RRA0 63 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 A8MZ25 164 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 IGKV2D-40P01614 121 aaPredicted RBP5.32□□□□□ -1.56
USP1-202ENST00000371146 FRMD6-AS1P0C7T7 363 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 IGHV4-30-4P0DP06 118 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 MALP21145 153 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 FOXI1Q12951 378 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 MS4A6AQ9H2W1 248 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 DEDDO75618 318 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 ID3Q02535 119 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 FAM74A4Q5TZK3 123 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 BAGE3Q86Y29 109 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 BAGE2Q86Y30 109 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 KCNS1Q96KK3 526 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 VSIRQ9H7M9 311 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 TRGV2A0A075B6R0 118 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 F5H697 171 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 TAS2R45P59539 299 aa5.32□□□□□ -1.56
USP1-202ENST00000371146 IGHV7-4-1A0A0J9YVY3 117 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 LINC00694P0DN24 101 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 IFITM1P13164 125 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 ZNF324O75467 553 aaPredicted RBP5.31□□□□□ -1.56
USP1-202ENST00000371146 C2orf83Q53S99 150 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 MBD3L1Q8WWY6 194 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 BORCS7Q96B45 105 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 I3L2K1 104 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 BCL2P10415 239 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 DEFB114Q30KQ6 69 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 ZC2HC1AQ96GY0 325 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 PRADC1Q9BSG0 188 aa5.31□□□□□ -1.56
USP1-202ENST00000371146 YTHDF2Q9Y5A9 579 aaKnown RBP5.31□□□□□ -1.56
USP1-202ENST00000371146 IGKV1OR2-108A0A075B7D4 117 aa5.3□□□□□ -1.56
USP1-202ENST00000371146 TRBV9A0A0B4J1U6 114 aa5.3□□□□□ -1.56
USP1-202ENST00000371146 A0A0J9YY99 117 aa5.3□□□□□ -1.56
USP1-202ENST00000371146 GRIFINA4D1Z8 144 aa5.3□□□□□ -1.56
USP1-202ENST00000371146 ARL14EPLP0DKL9 152 aa5.3□□□□□ -1.56
USP1-202ENST00000371146 RPL23P62829 140 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms