RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 MYCNOSP40205 109 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 AP5S1Q9NUS5 200 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 PLXNB1O43157 2135 aa5.3□□□□□ -1.56
CSDE1-204ENST00000369530 TRAV3A0A0B4J244 114 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 WI2-2373I1.2A0A1W2PRP0 233 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 HIGD1CA8MV81 97 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 K7ERJ3 54 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 PROP1O75360 226 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 HES1Q14469 280 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 TMEM219Q86XT9 240 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 TMEM101Q96IK0 257 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 TRBV25-1A0A075B6N4 114 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 ZNF785A8K8V0 405 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 RPL13AP40429 203 aaKnown RBP5.29□□□□□ -1.56
CSDE1-204ENST00000369530 ZNF493Q6ZR52 646 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 FBXL15Q9H469 300 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 TRBV6-1A0A0K0K1D8 114 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 DUSP14O95147 198 aaKnown RBP5.29□□□□□ -1.56
CSDE1-204ENST00000369530 TMEM200BQ69YZ2 307 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 FAM19A5Q7Z5A7 132 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-204ENST00000369530 SSMEM1Q8WWF3 244 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 PLEKHA3Q9HB20 300 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 SELENOKQ9Y6D0 94 aa5.29□□□□□ -1.56
CSDE1-204ENST00000369530 TRBV20-1A0A075B6N2 111 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 A6NDX4 124 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 IGHV3-48P01763 117 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 MGST1P10620 155 aaKnown RBP5.28□□□□□ -1.56
CSDE1-204ENST00000369530 ORM2P19652 201 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 OR13C6PQ8NH95 151 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 SETD2Q9BYW2 2564 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-204ENST00000369530 FAM240AA0A1B0GVK7 77 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 UBE2D1P51668 147 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 PVRIGQ6DKI7 326 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 FLYWCH2Q96CP2 140 aaKnown RBP5.28□□□□□ -1.56
CSDE1-204ENST00000369530 KIR2DL4Q99706 377 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 MRPL20Q9BYC9 149 aaKnown RBP5.28□□□□□ -1.56
CSDE1-204ENST00000369530 SCGB2A1O75556 95 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 TTC32Q5I0X7 151 aa5.28□□□□□ -1.56
CSDE1-204ENST00000369530 RPP21Q9H633 154 aaKnown RBP5.28□□□□□ -1.56
CSDE1-204ENST00000369530 TRAV4A0A0B4J268 109 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 IGKV1-16P04430 117 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 ATP5G1P05496 136 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 BRWD1-AS2P59051 145 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 ODF3Q96PU9 254 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 ZNF702PQ9H963 129 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 NHP2Q9NX24 153 aaKnown RBP5.27□□□□□ -1.57
CSDE1-204ENST00000369530 CSPG4Q6UVK1 2322 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 DNAJC9-AS1A6NH13 148 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 LINC00694P0DN24 101 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 RPL7P18124 248 aaKnown RBP5.27□□□□□ -1.57
CSDE1-204ENST00000369530 UBE2E1P51965 193 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 MFAP4P55083 255 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 DEFB121Q5J5C9 76 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 LYRM7Q5U5X0 104 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 NPIPB3Q92617 1050 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 TET2Q6N021 2002 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-204ENST00000369530 IGHV3-21A0A0B4J1V1 117 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 C9JAW5 83 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 TPSG1Q9NRR2 321 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 ZNF355PQ9NSJ1 428 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 HIGD1AQ9Y241 93 aa5.27□□□□□ -1.57
CSDE1-204ENST00000369530 IGHV1-69DA0A0B4J2H0 117 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 SNCGO76070 127 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 LTAP01374 205 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 IGHV1-69P01742 117 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 IGHV1-8P0DP01 117 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 MIC13Q5XKP0 118 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 LINC00526Q96FQ7 95 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 ACANP16112 2415 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 CD24P25063 80 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 HSPE1P61604 102 aaKnown RBP5.26□□□□□ -1.57
CSDE1-204ENST00000369530 ERHP84090 104 aaKnown RBP5.26□□□□□ -1.57
CSDE1-204ENST00000369530 POM121L12Q8N7R1 296 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 NBEAL1Q6ZS30 2694 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 IGKV2D-26A0A0A0MRZ7 120 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 ORM1P02763 201 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 C10orf55Q5SWW7 151 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 FAM167A-AS1Q96KT0 104 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 PRADC1Q9BSG0 188 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 MCRIP2Q9BUT9 160 aaKnown RBP5.26□□□□□ -1.57
CSDE1-204ENST00000369530 C21orf62Q9NYP8 219 aa5.26□□□□□ -1.57
CSDE1-204ENST00000369530 SAA1P0DJI8 122 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-204ENST00000369530 VMA21Q3ZAQ7 101 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 ZNF329Q86UD4 541 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-204ENST00000369530 PRNDQ9UKY0 176 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 F5H768 121 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 NPFFO15130 113 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 HBDP02042 147 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 EGR2P11161 476 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-204ENST00000369530 SLC25A48Q6ZT89 311 aaKnown RBP5.25□□□□□ -1.57
CSDE1-204ENST00000369530 OR1L4Q8NGR5 311 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 MYMXA0A1B0GTQ4 84 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 C3orf22Q8N5N4 141 aa5.25□□□□□ -1.57
CSDE1-204ENST00000369530 NOTCH2Q04721 2471 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 NCBP2LA6PVI3 153 aaKnown RBP5.24□□□□□ -1.57
CSDE1-204ENST00000369530 CRYGAP11844 174 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 HLA-DMBP28068 263 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms