RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 HIST1H2BNQ99877 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BMQ99879 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 TRGV11A0A075B6L2 103 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 APCSP02743 223 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 SSTP61278 116 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 C9orf85Q96MD7 179 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 MSRB1Q9NZV6 116 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 TIMM8BQ9Y5J9 83 aaPredicted RBP17.42■□□□□ 0.38
SNX3-203ENST00000368979 TRRAPQ9Y4A5 3859 aa17.41■□□□□ 0.38
SNX3-203ENST00000368979 EGFEM1PQ0D2K5 195 aa17.41■□□□□ 0.38
SNX3-203ENST00000368979 TMEM256Q8N2U0 113 aa17.41■□□□□ 0.38
SNX3-203ENST00000368979 CBY3A6NI87 242 aa17.4■□□□□ 0.38
SNX3-203ENST00000368979 LINC01587Q99440 93 aa17.4■□□□□ 0.38
SNX3-203ENST00000368979 C1QTNF4Q9BXJ3 329 aa17.4■□□□□ 0.38
SNX3-203ENST00000368979 MDFICQ9P1T7 246 aa17.4■□□□□ 0.38
SNX3-203ENST00000368979 SPANXN1Q5VSR9 72 aa17.39■□□□□ 0.37
SNX3-203ENST00000368979 PHLDA3Q9Y5J5 127 aa17.39■□□□□ 0.37
SNX3-203ENST00000368979 SPRY2O43597 315 aa17.38■□□□□ 0.37
SNX3-203ENST00000368979 NXPH4O95158 308 aa17.38■□□□□ 0.37
SNX3-203ENST00000368979 FBN3Q75N90 2809 aa17.38■□□□□ 0.37
SNX3-203ENST00000368979 KRTAP10-11P60412 298 aa17.37■□□□□ 0.37
SNX3-203ENST00000368979 KIAA1644Q3SXP7 199 aa17.37■□□□□ 0.37
SNX3-203ENST00000368979 CSNK1G2-AS1Q8NCQ2 148 aa17.37■□□□□ 0.37
SNX3-203ENST00000368979 TMEM191AQ9H0A3 160 aa17.37■□□□□ 0.37
SNX3-203ENST00000368979 CSTL1Q9H114 145 aa17.37■□□□□ 0.37
SNX3-203ENST00000368979 M0R381 172 aa17.36■□□□□ 0.37
SNX3-203ENST00000368979 HTN1P15515 57 aa17.36■□□□□ 0.37
SNX3-203ENST00000368979 DMRTA1Q5VZB9 504 aa17.36■□□□□ 0.37
SNX3-203ENST00000368979 TMEM208Q9BTX3 173 aa17.36■□□□□ 0.37
SNX3-203ENST00000368979 PRM2P04554 102 aa17.35■□□□□ 0.37
SNX3-203ENST00000368979 LOC102724200A0A096LPH7 203 aaPredicted RBP17.34■□□□□ 0.37
SNX3-203ENST00000368979 FAM104BQ5XKR9 115 aa17.34■□□□□ 0.37
SNX3-203ENST00000368979 AMN1Q8IY45 258 aa17.34■□□□□ 0.37
SNX3-203ENST00000368979 ZMAT5Q9UDW3 170 aaKnown RBP17.34■□□□□ 0.37
SNX3-203ENST00000368979 GOLT1BQ9Y3E0 138 aa17.34■□□□□ 0.37
SNX3-203ENST00000368979 NOTCH3Q9UM47 2321 aa17.34■□□□□ 0.37
SNX3-203ENST00000368979 C11orf72Q8NBR9 251 aa17.33■□□□□ 0.37
SNX3-203ENST00000368979 IGHV3OR16-12A0A075B7B8 117 aa17.32■□□□□ 0.36
SNX3-203ENST00000368979 ZNF415Q09FC8 603 aa17.32■□□□□ 0.36
SNX3-203ENST00000368979 G3V4G9 280 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 EVI2AP22794 236 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 SRIP30626 198 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 SAMD5Q5TGI4 173 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 ZNF705AQ6ZN79 300 aaPredicted RBP17.31■□□□□ 0.36
SNX3-203ENST00000368979 KIR2DL5BA0A0G2JN68 375 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 KIR2DL5BA0A0G2JPC4 375 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 S100A6P06703 90 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 NDUFA6P56556 154 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 KIR2DL5AQ8N109 375 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 KIR2DL5BQ8NHK3 375 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 RNF185Q96GF1 192 aa17.31■□□□□ 0.36
SNX3-203ENST00000368979 ALKBH7Q9BT30 221 aaPredicted RBP17.31■□□□□ 0.36
SNX3-203ENST00000368979 MUC4Q99102 2169 aa17.3■□□□□ 0.36
SNX3-203ENST00000368979 IGHV4-30-4P0DP06 118 aa17.3■□□□□ 0.36
SNX3-203ENST00000368979 AZU1P20160 251 aa17.3■□□□□ 0.36
SNX3-203ENST00000368979 SMIM15Q7Z3B0 74 aa17.3■□□□□ 0.36
SNX3-203ENST00000368979 ANK2Q01484 3957 aa17.3■□□□□ 0.36
SNX3-203ENST00000368979 MRPL51Q4U2R6 128 aaKnown RBP17.29■□□□□ 0.36
SNX3-203ENST00000368979 SYT8Q8NBV8 401 aa17.29■□□□□ 0.36
SNX3-203ENST00000368979 RNASE8Q8TDE3 154 aaKnown RBP17.29■□□□□ 0.36
SNX3-203ENST00000368979 AP1S3Q96PC3 154 aa17.29■□□□□ 0.36
SNX3-203ENST00000368979 GSN-AS1Q9NRJ2 163 aa17.29■□□□□ 0.36
SNX3-203ENST00000368979 C5orf52A6NGY3 159 aa17.28■□□□□ 0.36
SNX3-203ENST00000368979 RAB4AP20338 218 aa17.28■□□□□ 0.36
SNX3-203ENST00000368979 APOC4P55056 127 aa17.28■□□□□ 0.36
SNX3-203ENST00000368979 IL17DQ8TAD2 202 aa17.28■□□□□ 0.36
SNX3-203ENST00000368979 COA6Q5JTJ3 125 aaKnown RBP17.27■□□□□ 0.36
SNX3-203ENST00000368979 TMEM263Q8WUH6 116 aaKnown RBP17.27■□□□□ 0.36
SNX3-203ENST00000368979 RCHY1Q96PM5 261 aa17.27■□□□□ 0.36
SNX3-203ENST00000368979 SNRPEP62304 92 aaKnown RBP17.26■□□□□ 0.35
SNX3-203ENST00000368979 Q0VG73 95 aa17.26■□□□□ 0.35
SNX3-203ENST00000368979 PTH2Q96A98 100 aa17.26■□□□□ 0.35
SNX3-203ENST00000368979 SPXQ9BT56 116 aa17.26■□□□□ 0.35
SNX3-203ENST00000368979 U3KQK5 164 aa17.26■□□□□ 0.35
SNX3-203ENST00000368979 OR10J3Q5JRS4 329 aa17.26■□□□□ 0.35
SNX3-203ENST00000368979 DPH3P1Q9H4G8 78 aa17.26■□□□□ 0.35
SNX3-203ENST00000368979 CMYA5Q8N3K9 4069 aa17.25■□□□□ 0.35
SNX3-203ENST00000368979 M0R2P5 195 aa17.25■□□□□ 0.35
SNX3-203ENST00000368979 ZNF876PQ49A33 203 aa17.25■□□□□ 0.35
SNX3-203ENST00000368979 PIK3CD-AS1Q5SR53 167 aa17.25■□□□□ 0.35
SNX3-203ENST00000368979 C14orf178Q8N769 122 aaPredicted RBP17.25■□□□□ 0.35
SNX3-203ENST00000368979 C18orf32Q8TCD1 76 aa17.25■□□□□ 0.35
SNX3-203ENST00000368979 KIF25-AS1Q9Y6Z4 181 aa17.25■□□□□ 0.35
SNX3-203ENST00000368979 A8MZ25 164 aa17.24■□□□□ 0.35
SNX3-203ENST00000368979 D6R8Y8 96 aa17.24■□□□□ 0.35
SNX3-203ENST00000368979 JPT2Q9H910 190 aa17.24■□□□□ 0.35
SNX3-203ENST00000368979 ORMDL3Q8N138 153 aa17.23■□□□□ 0.35
SNX3-203ENST00000368979 C16orf74Q96GX8 76 aa17.23■□□□□ 0.35
SNX3-203ENST00000368979 LOC105371267A0A1B0GV96 52 aa17.22■□□□□ 0.35
SNX3-203ENST00000368979 RRN3P1Q2M238 152 aa17.22■□□□□ 0.35
SNX3-203ENST00000368979 POM121L12Q8N7R1 296 aa17.22■□□□□ 0.35
SNX3-203ENST00000368979 PLAC8L1A1L4L8 177 aa17.21■□□□□ 0.35
SNX3-203ENST00000368979 PPBPP02775 128 aa17.21■□□□□ 0.35
SNX3-203ENST00000368979 HOXA5P20719 270 aa17.21■□□□□ 0.35
SNX3-203ENST00000368979 LINC00315P59091 139 aa17.21■□□□□ 0.35
SNX3-203ENST00000368979 SMKR1H3BMG3 65 aa17.21■□□□□ 0.34
SNX3-203ENST00000368979 UBE2CO00762 179 aa17.21■□□□□ 0.34
SNX3-203ENST00000368979 CKS2P33552 79 aa17.21■□□□□ 0.34
SNX3-203ENST00000368979 IQCJQ1A5X6 159 aa17.21■□□□□ 0.34
SNX3-203ENST00000368979 NCR2O95944 276 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms