RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MUC21A0A140T8X8 626 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 F5H768 121 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 LCE2BO14633 110 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 RPS20P60866 119 aaKnown RBP9.84□□□□□ -0.83
TPM3-211ENST00000368531 ZNF876PQ49A33 203 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 DNLZQ5SXM8 178 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 UQCC3Q6UW78 93 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 TPPP3Q9BW30 176 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
TPM3-211ENST00000368531 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 PHLDA3Q9Y5J5 127 aa9.84□□□□□ -0.83
TPM3-211ENST00000368531 ATP5G1P05496 136 aa9.83□□□□□ -0.84
TPM3-211ENST00000368531 CEMP1Q6PRD7 247 aaPredicted RBP9.83□□□□□ -0.84
TPM3-211ENST00000368531 RASL10AQ92737 203 aa9.83□□□□□ -0.84
TPM3-211ENST00000368531 ISOC2Q96AB3 205 aa9.83□□□□□ -0.84
TPM3-211ENST00000368531 XKRY2A2RUG3 117 aa9.82□□□□□ -0.84
TPM3-211ENST00000368531 NUPR2A6NF83 97 aa9.82□□□□□ -0.84
TPM3-211ENST00000368531 C3orf84H3BNL1 204 aa9.82□□□□□ -0.84
TPM3-211ENST00000368531 M0R381 172 aa9.82□□□□□ -0.84
TPM3-211ENST00000368531 FAM231DQ6ZW35 169 aa9.82□□□□□ -0.84
TPM3-211ENST00000368531 FER1L6-AS1Q8NA97 138 aa9.82□□□□□ -0.84
TPM3-211ENST00000368531 TMEM218A2RU14 115 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 IGLL5B9A064 214 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 F8W036 122 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 CXCL1P09341 107 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 C15orf54Q8N8G6 183 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 SYT8Q8NBV8 401 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 OR4C5Q8NGB2 326 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 OR10G8Q8NGN5 311 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 OR10AG1Q8NH19 301 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 OSTCQ9NRP0 149 aa9.81□□□□□ -0.84
TPM3-211ENST00000368531 NACAE9PAV3 2078 aa9.8□□□□□ -0.84
TPM3-211ENST00000368531 HOXA5P20719 270 aa9.8□□□□□ -0.84
TPM3-211ENST00000368531 POM121L12Q8N7R1 296 aa9.8□□□□□ -0.84
TPM3-211ENST00000368531 SFRP2Q96HF1 295 aa9.8□□□□□ -0.84
TPM3-211ENST00000368531 ZNF479Q96JC4 524 aa9.8□□□□□ -0.84
TPM3-211ENST00000368531 JPT2Q9H910 190 aa9.8□□□□□ -0.84
TPM3-211ENST00000368531 SCRT2Q9NQ03 307 aa9.8□□□□□ -0.84
TPM3-211ENST00000368531 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
TPM3-211ENST00000368531 IGHV3-73A0A0B4J1V6 119 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 TRGV4A0A0C4DH28 118 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 A8MWL6 223 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 SNAI2O43623 268 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 OR5AL1P0C617 328 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 IGLC6P0CF74 106 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 MED14OSP0DP75 135 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 ADCYAP1P18509 176 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 SPANXN1Q5VSR9 72 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 ZFP82Q8N141 532 aa9.79□□□□□ -0.84
TPM3-211ENST00000368531 SSBP4Q9BWG4 385 aaPredicted RBP9.79□□□□□ -0.84
TPM3-211ENST00000368531 TRAV4A0A0B4J268 109 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 A0A0J9YY99 117 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 RS1O15537 224 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 TMEM88Q6PEY1 159 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 GTSF1Q8WW33 167 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 PTH2Q96A98 100 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 C18orf15Q96N68 181 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 V9GYV3 84 aa9.78□□□□□ -0.84
TPM3-211ENST00000368531 STAB2Q8WWQ8 2551 aa9.77□□□□□ -0.84
TPM3-211ENST00000368531 IGHV4-4A0A075B6R2 117 aa9.77□□□□□ -0.85
TPM3-211ENST00000368531 FHL2Q14192 279 aa9.77□□□□□ -0.85
TPM3-211ENST00000368531 PGLYRP4Q96LB8 373 aa9.77□□□□□ -0.85
TPM3-211ENST00000368531 SAMD10Q9BYL1 202 aa9.77□□□□□ -0.85
TPM3-211ENST00000368531 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 A0A087WWL8 130 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 A0A1W2PPQ1 181 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 A8MWV9 139 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 F2Z2F3 143 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 PNRC1Q12796 327 aaPredicted RBP9.76□□□□□ -0.85
TPM3-211ENST00000368531 CT83Q5H943 113 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 FAM74A4Q5TZK3 123 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 SLC7A5P1Q8MH63 180 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 TSKUQ8WUA8 353 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 SEC11CQ9BY50 192 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 MSRB1Q9NZV6 116 aa9.76□□□□□ -0.85
TPM3-211ENST00000368531 CTRLP40313 264 aa9.75□□□□□ -0.85
TPM3-211ENST00000368531 CACNG7P62955 275 aa9.75□□□□□ -0.85
TPM3-211ENST00000368531 RNF212Q495C1 297 aa9.75□□□□□ -0.85
TPM3-211ENST00000368531 NDUFAF3Q9BU61 184 aa9.75□□□□□ -0.85
TPM3-211ENST00000368531 HHLA3Q9XRX5 114 aa9.75□□□□□ -0.85
TPM3-211ENST00000368531 HIGD1CA8MV81 97 aa9.74□□□□□ -0.85
TPM3-211ENST00000368531 PAX4O43316 350 aa9.74□□□□□ -0.85
TPM3-211ENST00000368531 NXPH4O95158 308 aa9.74□□□□□ -0.85
TPM3-211ENST00000368531 NUDT3O95989 172 aa9.74□□□□□ -0.85
TPM3-211ENST00000368531 NTF3P20783 257 aa9.74□□□□□ -0.85
TPM3-211ENST00000368531 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
TPM3-211ENST00000368531 C14orf178Q8N769 122 aaPredicted RBP9.74□□□□□ -0.85
TPM3-211ENST00000368531 MT-ND4LP03901 98 aa9.73□□□□□ -0.85
TPM3-211ENST00000368531 CRYBA4P53673 196 aa9.73□□□□□ -0.85
TPM3-211ENST00000368531 TWIST1Q15672 202 aa9.73□□□□□ -0.85
TPM3-211ENST00000368531 BORCS7Q96B45 105 aa9.73□□□□□ -0.85
TPM3-211ENST00000368531 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
TPM3-211ENST00000368531 PRO0255Q9UI72 69 aa9.73□□□□□ -0.85
TPM3-211ENST00000368531 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
TPM3-211ENST00000368531 PPP1R2P9O14990 202 aa9.72□□□□□ -0.85
TPM3-211ENST00000368531 CRYGDP07320 174 aa9.72□□□□□ -0.85
TPM3-211ENST00000368531 SMIM17P0DL12 118 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms