RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
EFNA1-201ENST00000368406 OR10G8Q8NGN5 311 aa9.05□□□□□ -0.96
EFNA1-201ENST00000368406 OSTCQ9NRP0 149 aa9.05□□□□□ -0.96
EFNA1-201ENST00000368406 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
EFNA1-201ENST00000368406 A8MWL6 223 aa9.04□□□□□ -0.96
EFNA1-201ENST00000368406 M0R2P5 195 aa9.04□□□□□ -0.96
EFNA1-201ENST00000368406 CXCL1P09341 107 aa9.04□□□□□ -0.96
EFNA1-201ENST00000368406 RNASE3P12724 160 aaKnown RBP9.04□□□□□ -0.96
EFNA1-201ENST00000368406 NANOS2P60321 138 aaKnown RBP9.04□□□□□ -0.96
EFNA1-201ENST00000368406 Q6ZTI0 123 aa9.04□□□□□ -0.96
EFNA1-201ENST00000368406 FER1L6-AS1Q8NA97 138 aa9.04□□□□□ -0.96
EFNA1-201ENST00000368406 IL36BQ9NZH7 164 aa9.04□□□□□ -0.96
EFNA1-201ENST00000368406 M0R381 172 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 HTN3P15516 51 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 SSTP61278 116 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 SPANXN1Q5VSR9 72 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 ZFAND6Q6FIF0 208 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 BORCS7Q96B45 105 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 C9orf85Q96MD7 179 aa9.03□□□□□ -0.96
EFNA1-201ENST00000368406 A0A1W2PPQ1 181 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 PPP1R2P9O14990 202 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 SPINK4O60575 86 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 MT-ND4LP03901 98 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 MED14OSP0DP75 135 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 LGALS9BQ3B8N2 356 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 CT83Q5H943 113 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 ZFP82Q8N141 532 aa9.02□□□□□ -0.97
EFNA1-201ENST00000368406 MUC21A0A0G2JKD1 596 aa9.01□□□□□ -0.97
EFNA1-201ENST00000368406 MUC21A0A140T8X8 626 aa9.01□□□□□ -0.97
EFNA1-201ENST00000368406 APOC3P02656 99 aa9.01□□□□□ -0.97
EFNA1-201ENST00000368406 IGHV3-53P01767 116 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 OR5AL1P0C617 328 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 C12orf74Q32Q52 190 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 RNF212Q495C1 297 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 Q6ZTC4 211 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 TSKUQ8WUA8 353 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 PGLYRP4Q96LB8 373 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 CARHSP1Q9Y2V2 147 aaKnown RBP9□□□□□ -0.97
EFNA1-201ENST00000368406 V9GYV3 84 aa9□□□□□ -0.97
EFNA1-201ENST00000368406 NUPR2A6NF83 97 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 F2Z2F3 143 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 SNAI2O43623 268 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 ATP5G1P05496 136 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 IGLC6P0CF74 106 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 CACNG7P62955 275 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 LYZL1Q6UWQ5 148 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 OR4C5Q8NGB2 326 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 ANAPC16Q96DE5 110 aa8.99□□□□□ -0.97
EFNA1-201ENST00000368406 TRAV10A0A0B4J240 114 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 HIGD1CA8MV81 97 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 CEMP1Q6PRD7 247 aaPredicted RBP8.98□□□□□ -0.97
EFNA1-201ENST00000368406 SVBPQ8N300 66 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 RASL10AQ92737 203 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 NDUFAF3Q9BU61 184 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 GFRA4Q9GZZ7 299 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 NAT8BQ9UHF3 227 aa8.98□□□□□ -0.97
EFNA1-201ENST00000368406 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 TRAV4A0A0B4J268 109 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 A8MWV9 139 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 F5H768 121 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 SNAPINO95295 136 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 SMIM17P0DL12 118 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 CTRLP40313 264 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 RHEBQ15382 184 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 TWIST1Q15672 202 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 C10orf91Q5T1B1 145 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 DMRTA1Q5VZB9 504 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 LINC00612Q8N6U2 182 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 CLRN3Q8NCR9 226 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 PHLDA1Q8WV24 401 aaPredicted RBP8.97□□□□□ -0.97
EFNA1-201ENST00000368406 GTSF1Q8WW33 167 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 AP1S3Q96PC3 154 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 RPS10P5Q9NQ39 176 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 FAM231BA6NCW3 169 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 SMIM15Q7Z3B0 74 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 ZNF575Q86XF7 245 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 PTH2Q96A98 100 aa8.97□□□□□ -0.97
EFNA1-201ENST00000368406 SSBP4Q9BWG4 385 aaPredicted RBP8.97□□□□□ -0.97
EFNA1-201ENST00000368406 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
EFNA1-201ENST00000368406 IGHV3-73A0A0B4J1V6 119 aa8.96□□□□□ -0.98
EFNA1-201ENST00000368406 TRGC1P0CF51 173 aa8.96□□□□□ -0.98
EFNA1-201ENST00000368406 PIK3CD-AS1Q5SR53 167 aa8.96□□□□□ -0.98
EFNA1-201ENST00000368406 CTDSP1Q9GZU7 261 aa8.96□□□□□ -0.98
EFNA1-201ENST00000368406 MUC4Q99102 2169 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 PLECQ15149 4684 aaKnown RBP8.95□□□□□ -0.98
EFNA1-201ENST00000368406 A0A087WWL8 130 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 A0A1B0GUT8 65 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 C7orf77A4D0Y5 90 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 RHODO00212 210 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 NXPH4O95158 308 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 NTF3P20783 257 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 S100PP25815 95 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 CFAP126Q5VTH2 177 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms