RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PTPN13Q12923 2485 aa13.6□□□□□ -0.23
UBQLN4-201ENST00000368309 H3BUT2 72 aa13.6□□□□□ -0.23
UBQLN4-201ENST00000368309 IGKV3-20P01619 116 aa13.6□□□□□ -0.23
UBQLN4-201ENST00000368309 MXRA5Q9NR99 2828 aa13.59□□□□□ -0.23
UBQLN4-201ENST00000368309 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.59□□□□□ -0.23
UBQLN4-201ENST00000368309 MUC4Q99102 2169 aa13.59□□□□□ -0.23
UBQLN4-201ENST00000368309 GCSHP23434 173 aa13.58□□□□□ -0.23
UBQLN4-201ENST00000368309 NEGR1Q7Z3B1 354 aa13.58□□□□□ -0.23
UBQLN4-201ENST00000368309 AP1S3Q96PC3 154 aa13.58□□□□□ -0.23
UBQLN4-201ENST00000368309 JPT2Q9H910 190 aa13.58□□□□□ -0.23
UBQLN4-201ENST00000368309 PSMB8P28062 276 aa13.58□□□□□ -0.24
UBQLN4-201ENST00000368309 DCANP1Q8TF63 244 aa13.58□□□□□ -0.24
UBQLN4-201ENST00000368309 A0A087WX48 190 aa13.58□□□□□ -0.24
UBQLN4-201ENST00000368309 TRAV12-3A0A0B4J271 114 aa13.58□□□□□ -0.24
UBQLN4-201ENST00000368309 ZNF688P0C7X2 276 aa13.58□□□□□ -0.24
UBQLN4-201ENST00000368309 SCGB3A1Q96QR1 104 aa13.58□□□□□ -0.24
UBQLN4-201ENST00000368309 ABCA12Q86UK0 2595 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 H3BRM9 83 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 TGFAP01135 160 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 MAPKAPK5-AS1Q8N8E1 139 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 TRBV25-1A0A075B6N4 114 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 C9orf118A6NHY6 69 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 FAM159AQ6UWV7 190 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
UBQLN4-201ENST00000368309 GAGE10A6NGK3 116 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 K7EMI3 77 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 PRB1P04280 392 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 ID1P41134 155 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 FXYD2P54710 66 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 PSMG4Q5JS54 123 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 DUX5Q96PT3 197 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 CHAC1Q9BUX1 264 aa13.56□□□□□ -0.24
UBQLN4-201ENST00000368309 RNF223E7ERA6 249 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 K7EMT4 169 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 ORMDL2Q53FV1 153 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 CBY1Q9Y3M2 126 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 AGRNO00468 2067 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 TRAV12-2A0A075B6T6 113 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 KLLNB2CW77 178 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 CD7P09564 240 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 C20orf78Q9BR46 151 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 A0A087WWL8 130 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 RBX1P62877 108 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 LINC01356Q8N9X3 169 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 CSTL1Q9H114 145 aa13.55□□□□□ -0.24
UBQLN4-201ENST00000368309 RNF151Q2KHN1 245 aa13.54□□□□□ -0.24
UBQLN4-201ENST00000368309 C2orf66Q6UXQ4 117 aa13.53□□□□□ -0.24
UBQLN4-201ENST00000368309 TOMM6Q96B49 74 aa13.53□□□□□ -0.24
UBQLN4-201ENST00000368309 CST9LQ9H4G1 147 aa13.53□□□□□ -0.24
UBQLN4-201ENST00000368309 GATA3P23771 443 aa13.53□□□□□ -0.24
UBQLN4-201ENST00000368309 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
UBQLN4-201ENST00000368309 NAV2Q8IVL1 2488 aa13.53□□□□□ -0.24
UBQLN4-201ENST00000368309 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.24
UBQLN4-201ENST00000368309 H7C1H1 209 aa13.52□□□□□ -0.24
UBQLN4-201ENST00000368309 MED14OSP0DP75 135 aa13.52□□□□□ -0.24
UBQLN4-201ENST00000368309 CHTOPQ9Y3Y2 248 aaKnown RBP13.52□□□□□ -0.24
UBQLN4-201ENST00000368309 F5H697 171 aa13.52□□□□□ -0.25
UBQLN4-201ENST00000368309 LINC00315P59091 139 aa13.52□□□□□ -0.25
UBQLN4-201ENST00000368309 F8VRH5 84 aa13.52□□□□□ -0.25
UBQLN4-201ENST00000368309 K7ERJ3 54 aa13.52□□□□□ -0.25
UBQLN4-201ENST00000368309 MYO9AB2RTY4 2548 aa13.52□□□□□ -0.25
UBQLN4-201ENST00000368309 PLNP26678 52 aa13.51□□□□□ -0.25
UBQLN4-201ENST00000368309 DSCR9P59020 149 aa13.51□□□□□ -0.25
UBQLN4-201ENST00000368309 HIGD1BQ9P298 99 aa13.51□□□□□ -0.25
UBQLN4-201ENST00000368309 KIF25-AS1Q9Y6Z4 181 aa13.51□□□□□ -0.25
UBQLN4-201ENST00000368309 TLN2Q9Y4G6 2542 aa13.51□□□□□ -0.25
UBQLN4-201ENST00000368309 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
UBQLN4-201ENST00000368309 SLC25A16P16260 332 aa13.51□□□□□ -0.25
UBQLN4-201ENST00000368309 FAM74A4Q5TZK3 123 aa13.5□□□□□ -0.25
UBQLN4-201ENST00000368309 NEXN-AS1Q8NBZ9 246 aa13.5□□□□□ -0.25
UBQLN4-201ENST00000368309 SMIM13P0DJ93 91 aa13.5□□□□□ -0.25
UBQLN4-201ENST00000368309 MDFICQ9P1T7 246 aa13.5□□□□□ -0.25
UBQLN4-201ENST00000368309 USP24Q9UPU5 2620 aa13.5□□□□□ -0.25
UBQLN4-201ENST00000368309 TRAV12-1A0A0B4J245 112 aa13.49□□□□□ -0.25
UBQLN4-201ENST00000368309 BAALCQ8WXS3 180 aa13.49□□□□□ -0.25
UBQLN4-201ENST00000368309 ZNF580Q9UK33 172 aa13.49□□□□□ -0.25
UBQLN4-201ENST00000368309 NHP2Q9NX24 153 aaKnown RBP13.49□□□□□ -0.25
UBQLN4-201ENST00000368309 A0A096LNT2 108 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 PRSS29PA6NIE9 313 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 DUSP14O95147 198 aaKnown RBP13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 HLA-DRB4P13762 266 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 SUMO4Q6EEV6 95 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 GTF2H5Q6ZYL4 71 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 BEX4Q9NWD9 120 aaPredicted RBP13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 HLA-DRB4X5D2U9 266 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 SNRPD3P62318 126 aaKnown RBP13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 SPINK13Q1W4C9 94 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 OCIAD2Q56VL3 154 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 UFSP1Q6NVU6 142 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 NXPH4O95158 308 aa13.48□□□□□ -0.25
UBQLN4-201ENST00000368309 IGHV4OR15-8A0A075B7B6 117 aa13.47□□□□□ -0.25
UBQLN4-201ENST00000368309 A0A087WW49 117 aa13.47□□□□□ -0.25
UBQLN4-201ENST00000368309 A0A0J9YX75 114 aa13.47□□□□□ -0.25
UBQLN4-201ENST00000368309 A0A1W2PPM0 123 aa13.47□□□□□ -0.25
UBQLN4-201ENST00000368309 C21orf62-AS1Q17RA5 79 aa13.47□□□□□ -0.25
UBQLN4-201ENST00000368309 CEND1Q8N111 149 aa13.47□□□□□ -0.25
UBQLN4-201ENST00000368309 EMP1P54849 157 aa13.47□□□□□ -0.25
UBQLN4-201ENST00000368309 K7EP34 96 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1932.8 ms