RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C15orf54Q8N8G6 183 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 GTSF1Q8WW33 167 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 TMED6Q8WW62 240 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 PTH2Q96A98 100 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 NAA50Q9GZZ1 169 aaKnown RBP9.12□□□□□ -0.95
VAMP4-202ENST00000367740 UQCC1Q9NVA1 299 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 UBE2L5PA0A1B0GUS4 154 aa9.11□□□□□ -0.95
VAMP4-202ENST00000367740 BAXQ07812 192 aa9.11□□□□□ -0.95
VAMP4-202ENST00000367740 CTF1Q16619 201 aa9.11□□□□□ -0.95
VAMP4-202ENST00000367740 KRTAP26-1Q6PEX3 210 aa9.11□□□□□ -0.95
VAMP4-202ENST00000367740 MCFD2Q8NI22 146 aa9.11□□□□□ -0.95
VAMP4-202ENST00000367740 TVP23CQ96ET8 276 aa9.11□□□□□ -0.95
VAMP4-202ENST00000367740 DIRAS2Q96HU8 199 aa9.11□□□□□ -0.95
VAMP4-202ENST00000367740 RANP62826 216 aaKnown RBP9.1□□□□□ -0.95
VAMP4-202ENST00000367740 SRSF9Q13242 221 aaKnown RBP eCLIP9.1□□□□□ -0.95
VAMP4-202ENST00000367740 MPV17L2Q567V2 206 aa9.1□□□□□ -0.95
VAMP4-202ENST00000367740 UFSP1Q6NVU6 142 aa9.1□□□□□ -0.95
VAMP4-202ENST00000367740 CHAC2Q8WUX2 184 aa9.1□□□□□ -0.95
VAMP4-202ENST00000367740 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
VAMP4-202ENST00000367740 RABL2AQ9UBK7 228 aaPredicted RBP9.1□□□□□ -0.95
VAMP4-202ENST00000367740 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
VAMP4-202ENST00000367740 C9orf170A2RU37 121 aa9.09□□□□□ -0.95
VAMP4-202ENST00000367740 CST7O76096 145 aa9.09□□□□□ -0.95
VAMP4-202ENST00000367740 FAUP35544 74 aaKnown RBP9.09□□□□□ -0.95
VAMP4-202ENST00000367740 MIAQ16674 131 aa9.09□□□□□ -0.95
VAMP4-202ENST00000367740 IAH1Q2TAA2 248 aaPredicted RBP9.09□□□□□ -0.95
VAMP4-202ENST00000367740 CLRN3Q8NCR9 226 aa9.09□□□□□ -0.95
VAMP4-202ENST00000367740 OR10G7Q8NGN6 311 aa9.09□□□□□ -0.95
VAMP4-202ENST00000367740 SLC25A21Q9BQT8 299 aaPredicted RBP9.09□□□□□ -0.95
VAMP4-202ENST00000367740 A0A087WXM4 84 aa9.08□□□□□ -0.96
VAMP4-202ENST00000367740 MUC21A0A0G2JKD1 596 aa9.08□□□□□ -0.96
VAMP4-202ENST00000367740 MBPP02686 304 aaPredicted RBP9.08□□□□□ -0.96
VAMP4-202ENST00000367740 ANGP03950 147 aaKnown RBP9.08□□□□□ -0.96
VAMP4-202ENST00000367740 SLPIP03973 132 aa9.08□□□□□ -0.96
VAMP4-202ENST00000367740 RNASE3P12724 160 aaKnown RBP9.08□□□□□ -0.96
VAMP4-202ENST00000367740 CRCT1Q9UGL9 99 aa9.08□□□□□ -0.96
VAMP4-202ENST00000367740 hDV102S1A0JD36 115 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 A8MWV9 139 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 TMEM262E9PQX1 116 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 TAAR5O14804 337 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 FGF7P21781 194 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 OR2G3Q8NGZ4 309 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 JPT2Q9H910 190 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 TREM1Q9NP99 234 aa9.07□□□□□ -0.96
VAMP4-202ENST00000367740 RSL24D1Q9UHA3 163 aaKnown RBP9.07□□□□□ -0.96
VAMP4-202ENST00000367740 H7C1H1 209 aa9.06□□□□□ -0.96
VAMP4-202ENST00000367740 SMIM18P0DKX4 95 aa9.06□□□□□ -0.96
VAMP4-202ENST00000367740 TRIM63Q969Q1 353 aa9.06□□□□□ -0.96
VAMP4-202ENST00000367740 GSKIPQ9P0R6 139 aa9.06□□□□□ -0.96
VAMP4-202ENST00000367740 ZNF80P51504 273 aaPredicted RBP9.05□□□□□ -0.96
VAMP4-202ENST00000367740 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
VAMP4-202ENST00000367740 LYPD6BQ8NI32 183 aa9.05□□□□□ -0.96
VAMP4-202ENST00000367740 HYLS1Q96M11 299 aa9.05□□□□□ -0.96
VAMP4-202ENST00000367740 BCL7BQ9BQE9 202 aa9.05□□□□□ -0.96
VAMP4-202ENST00000367740 NPCDR1Q9BY65 106 aa9.05□□□□□ -0.96
VAMP4-202ENST00000367740 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
VAMP4-202ENST00000367740 FAM24AA6NFZ4 105 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 L7N2F9 121 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 OR7C2O60412 319 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 TCRBP04435 133 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 BCAP31P51572 246 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 VAMP2P63027 116 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 LGALSLQ3ZCW2 172 aaPredicted RBP9.04□□□□□ -0.96
VAMP4-202ENST00000367740 GOLT1AQ6ZVE7 132 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 C11orf1Q9H5F2 150 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 PRR34Q9NV39 138 aa9.04□□□□□ -0.96
VAMP4-202ENST00000367740 H2AFB1P0C5Y9 115 aa9.03□□□□□ -0.96
VAMP4-202ENST00000367740 H2AFB2P0C5Z0 115 aa9.03□□□□□ -0.96
VAMP4-202ENST00000367740 UBE2L3P68036 154 aaKnown RBP9.03□□□□□ -0.96
VAMP4-202ENST00000367740 MAJINQ3KP22 176 aa9.03□□□□□ -0.96
VAMP4-202ENST00000367740 PIK3CD-AS1Q5SR53 167 aa9.03□□□□□ -0.96
VAMP4-202ENST00000367740 TOMM5Q8N4H5 51 aa9.03□□□□□ -0.96
VAMP4-202ENST00000367740 A0A087WWL8 130 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 TRBV6-8A0A0A6YYG3 113 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 AP3S2P59780 193 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 UBE2D3P61077 147 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 UBE2D2P62837 147 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 COX6A2Q02221 97 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 SPANXN2Q5MJ10 180 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 STPG4Q8N801 248 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 SSBP4Q9BWG4 385 aaPredicted RBP9.02□□□□□ -0.97
VAMP4-202ENST00000367740 NMES1Q9C002 83 aa9.02□□□□□ -0.97
VAMP4-202ENST00000367740 IGKV2-24A0A0C4DH68 120 aa9.01□□□□□ -0.97
VAMP4-202ENST00000367740 CCSO14618 274 aa9.01□□□□□ -0.97
VAMP4-202ENST00000367740 GHRHP01286 108 aa9.01□□□□□ -0.97
VAMP4-202ENST00000367740 S100A11P31949 105 aa9.01□□□□□ -0.97
VAMP4-202ENST00000367740 SULT1A1P50225 295 aa9.01□□□□□ -0.97
VAMP4-202ENST00000367740 SLIRPQ9GZT3 109 aaKnown RBP9.01□□□□□ -0.97
VAMP4-202ENST00000367740 AP5S1Q9NUS5 200 aa9.01□□□□□ -0.97
VAMP4-202ENST00000367740 LSM5Q9Y4Y9 91 aaKnown RBP9.01□□□□□ -0.97
VAMP4-202ENST00000367740 IGSF23A1L1A6 192 aa9□□□□□ -0.97
VAMP4-202ENST00000367740 RHODO00212 210 aa9□□□□□ -0.97
VAMP4-202ENST00000367740 ATP6V1G2O95670 118 aa9□□□□□ -0.97
VAMP4-202ENST00000367740 SPCS2Q15005 226 aa9□□□□□ -0.97
VAMP4-202ENST00000367740 LINC00269Q8N2A0 174 aa9□□□□□ -0.97
VAMP4-202ENST00000367740 OTORQ9NRC9 128 aa9□□□□□ -0.97
VAMP4-202ENST00000367740 IGLV10-54A0A075B6I4 117 aa8.99□□□□□ -0.97
VAMP4-202ENST00000367740 GCGP01275 180 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms