RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PTH2Q96A98 100 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 C16orf92Q96LL3 132 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 SLC50A1Q9BRV3 221 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 LOC107984156A0A0G2JMH3 177 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 ARL17AQ8IVW1 177 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 RASL10AQ92737 203 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
PRKN-205ENST00000366897 NBPF19A0A087WUL8 3843 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 M0R1W7 72 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 CCL21O00585 134 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 SCGB1D4Q6XE38 83 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 TMEM219Q86XT9 240 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 ZNF418Q8TF45 676 aaPredicted RBP10.34□□□□□ -0.75
PRKN-205ENST00000366897 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
PRKN-205ENST00000366897 IGHV3OR16-10A0A075B7F0 116 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 LINC01549A6NIU2 74 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 F6UB75 175 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 APOMO95445 188 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 SLC25A16P16260 332 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 S100A4P26447 101 aaKnown RBP10.33□□□□□ -0.76
PRKN-205ENST00000366897 SUMO2P61956 95 aaKnown RBP10.33□□□□□ -0.76
PRKN-205ENST00000366897 ZFP2Q6ZN57 461 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 METTL26Q96S19 204 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 SORL1Q92673 2214 aa10.33□□□□□ -0.76
PRKN-205ENST00000366897 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
PRKN-205ENST00000366897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRKN-205ENST00000366897 RBAKDNA6NC62 111 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 J3QR89 54 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 PSMG4Q5JS54 123 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 NDUFS8O00217 210 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 HOXA3O43365 443 aaPredicted RBP10.32□□□□□ -0.76
PRKN-205ENST00000366897 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
PRKN-205ENST00000366897 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 GNRH2O43555 120 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 PSMB2P49721 201 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 SMCPP49901 116 aaPredicted RBP10.32□□□□□ -0.76
PRKN-205ENST00000366897 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
PRKN-205ENST00000366897 DUSP14O95147 198 aaKnown RBP10.31□□□□□ -0.76
PRKN-205ENST00000366897 TRBV12-3P01733 135 aa10.31□□□□□ -0.76
PRKN-205ENST00000366897 RPL11P62913 178 aaKnown RBP10.31□□□□□ -0.76
PRKN-205ENST00000366897 TAL2Q16559 108 aa10.31□□□□□ -0.76
PRKN-205ENST00000366897 CLUHP3Q96NS8 147 aa10.31□□□□□ -0.76
PRKN-205ENST00000366897 SAA4P35542 130 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 ARL3P36405 182 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 ANXA2RQ3ZCQ2 193 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 C9orf47Q6ZRZ4 202 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 SPATA25Q9BR10 227 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 PHLDA3Q9Y5J5 127 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
PRKN-205ENST00000366897 EBI3Q14213 229 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 NFE4Q86UQ8 179 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 SYT8Q8NBV8 401 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 JPT2Q9H910 190 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 DOPEY1Q5JWR5 2465 aa10.3□□□□□ -0.76
PRKN-205ENST00000366897 MUC4Q99102 2169 aa10.29□□□□□ -0.76
PRKN-205ENST00000366897 CRYBG3Q68DQ2 2970 aa10.29□□□□□ -0.76
PRKN-205ENST00000366897 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
PRKN-205ENST00000366897 SRD5A1P18405 259 aa10.29□□□□□ -0.76
PRKN-205ENST00000366897 RAB9AP51151 201 aa10.29□□□□□ -0.76
PRKN-205ENST00000366897 FHL3Q13643 280 aa10.29□□□□□ -0.76
PRKN-205ENST00000366897 ATP6V0BQ99437 205 aa10.29□□□□□ -0.76
PRKN-205ENST00000366897 ORMDL2Q53FV1 153 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 MRAP2Q96G30 205 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 RPL39P62891 51 aaKnown RBP10.28□□□□□ -0.76
PRKN-205ENST00000366897 EEF1AKMT3Q96AZ1 226 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 AJUBAQ96IF1 538 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 TSPAN13O95857 204 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 IGHV3-11P01762 117 aa10.28□□□□□ -0.76
PRKN-205ENST00000366897 IGHV4-4A0A075B6R2 117 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 A0A1W2PPR1 153 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 CKS1BP61024 79 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 Q6ZS46 218 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 DPH3P1Q9H4G8 78 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 CSPG4Q6UVK1 2322 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 FOXI1Q12951 378 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 GPHB5Q86YW7 130 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 SIRPDQ9H106 197 aa10.27□□□□□ -0.77
PRKN-205ENST00000366897 CENPEQ02224 2701 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 CRYGDP07320 174 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 MINOS1Q5TGZ0 78 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 CFAP126Q5VTH2 177 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 MINOS1-NBL1R4GNA1 71 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 A0A087WWL8 130 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 A0A1B0GV72 72 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 ASIPP42127 132 aa10.26□□□□□ -0.77
PRKN-205ENST00000366897 TSHBP01222 138 aa10.25□□□□□ -0.77
PRKN-205ENST00000366897 TSPEAR-AS2P59090 65 aa10.25□□□□□ -0.77
PRKN-205ENST00000366897 DLX4Q92988 240 aaPredicted RBP10.25□□□□□ -0.77
PRKN-205ENST00000366897 TP53TG1Q9Y2A0 90 aa10.25□□□□□ -0.77
PRKN-205ENST00000366897 CELSR2Q9HCU4 2923 aa10.25□□□□□ -0.77
PRKN-205ENST00000366897 C1QTNF4Q9BXJ3 329 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms