RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ATAD2BQ9ULI0 1458 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 TRAV1-2A0A0B4J238 106 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 TMEM256-PLSCR3K7ERE1 68 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 PFDN6O15212 129 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 C8GP07360 202 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 OCMP0CE72 109 aaPredicted RBP-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 TNNC1P63316 161 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 Q3ZCU0 254 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 C3orf33Q6P1S2 294 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 CYP2G1PQ6ZSU1 146 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 IFT20Q8IY31 132 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 COX7B2Q8TF08 81 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 CT55Q8WUE5 264 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 LXNQ9BS40 222 aa-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 LSM5Q9Y4Y9 91 aaKnown RBP-1.86□□□□□ -2.71
RNU6-54P-201ENST00000365563 ARAP1Q96P48 1450 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 CEP164Q9UPV0 1460 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 LRP6O75581 1613 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 KDM3BQ7LBC6 1761 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 AKAP11Q9UKA4 1901 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 TRAV5A0A0B4J249 113 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 LOC107986453A0A1B0GWG9 222 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 F8VZ95 297 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 H0YJX3 145 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 CST8O60676 142 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 HIST1H2BKO60814 126 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 NDUFS6O75380 124 aaKnown RBP-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 MT1FP04733 61 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 HIST1H2BJP06899 126 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 SAA1P0DJI8 122 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 POLR2JP52435 117 aaKnown RBP-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 HADHBP55084 474 aaKnown RBP-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 ERVS71-1P61550 626 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 OR8B8Q15620 311 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 FAM135BQ49AJ0 1406 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 SFXN4Q6P4A7 337 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 FAM151BQ6UXP7 276 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 SMG6Q86US8 1419 aaKnown RBP-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 OR51D1Q8NGF3 324 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 SLC35B4Q969S0 331 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 PPP1R2P1Q96PQ5 205 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 RABL2BQ9UNT1 228 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 MPC1Q9Y5U8 109 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 NUBP2Q9Y5Y2 271 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 NISCHQ9Y2I1 1504 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 ROBO3Q96MS0 1386 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 VPS13CQ709C8 3753 aa-1.87□□□□□ -2.71
RNU6-54P-201ENST00000365563 HECW1Q76N89 1606 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 FER1L6Q2WGJ9 1857 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 J3KT08 172 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 CDC42EP2O14613 210 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 BRI3O95415 125 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 SMIM6P0DI80 62 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 COX8AP10176 69 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 FABP4P15090 132 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 GTF2A1P52655 376 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 TMBIM6P55061 237 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 BASP1P80723 227 aaKnown RBP-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 HIST3H3Q16695 136 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 NKAIN1Q4KMZ8 207 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 FKBP1CQ5VVH2 108 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 COPS6Q7L5N1 327 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 KRTAP8-1Q8IUC2 63 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 LRRC20Q8TCA0 184 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 SMIM7Q9BQ49 75 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 GLTPQ9NZD2 209 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 APLNQ9ULZ1 77 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 ASB4Q9Y574 426 aa-1.88□□□□□ -2.71
RNU6-54P-201ENST00000365563 MUC3AQ02505 3323 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 ANKRD50Q9ULJ7 1429 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 ZMYM4Q5VZL5 1548 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 TMEM210A6NLX4 147 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 C5orf58C9J3I9 102 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 SYS1-DBNDD2H3BUS1 97 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 EDF1O60869 148 aaKnown RBP-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 CRHP06850 196 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 PET100P0DJ07 73 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 ARPP19P56211 112 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 DEFA3P59666 94 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 MED21Q13503 144 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 CFAP126Q5VTH2 177 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 BRK1Q8WUW1 75 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 DCUN1D1Q96GG9 259 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 MCEEQ96PE7 176 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 WFDC6Q9BQY6 131 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 PKIGQ9Y2B9 76 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 DOCK1Q14185 1865 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 GAPVD1Q14C86 1478 aa-1.89□□□□□ -2.71
RNU6-54P-201ENST00000365563 KIAA1107Q9UPP5 1409 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 SLIT1O75093 1534 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 TRPM1Q7Z4N2 1603 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 TTRP02766 147 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 IFNA6P05013 189 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 OCM2P0CE71 109 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 CCL2P13500 99 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 OMPP47874 163 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 NDUFA11Q86Y39 141 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 C20orf197Q8N268 126 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 PPDPFLQ8WWR9 84 aa-1.9□□□□□ -2.71
RNU6-54P-201ENST00000365563 AP3S1Q92572 193 aa-1.9□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms