RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 PROK2Q9HC23 129 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 TMEM14BQ9NUH8 114 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 V9GYQ6 96 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 HIVEP1P15822 2718 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 PTPRGP23470 1445 aa0.04□□□□□ -2.4
RNU4-48P-201ENST00000365559 SPEF2Q9C093 1822 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 KIAA0100Q14667 2235 aaKnown RBP0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 LAMA2P24043 3122 aaKnown RBP0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 UNC13BO14795 1591 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 HIVEP3Q5T1R4 2406 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 MUC3AQ02505 3323 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 LAMA3Q16787 3333 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRAV17A0A0B4J275 112 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 TRBV10-1A0A0K0K1A3 114 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 PNMA8CA0A1B0GUJ8 204 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 PGRMC1O00264 195 aaKnown RBP0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 IFNA21P01568 189 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 APOC1P02654 83 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 CCKP06307 115 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 S100GP29377 79 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 SDC4P31431 198 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 RPL22P35268 128 aaKnown RBP0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 PSPHP78330 225 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 KRTAP20-1Q3LI63 56 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 HSD17B12Q53GQ0 312 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 TOMM20LQ6UXN7 152 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 TMEM35BQ8NCS4 154 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 OR4S1Q8NGB4 309 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 OR9Q1Q8NGQ5 310 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 NAT14Q8WUY8 206 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 CCDC115Q96NT0 180 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 SPRR2GQ9BYE4 73 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 DNHD1Q96M86 4753 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 HERC2O95714 4834 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 MUC22E2RYF6 1773 aaPredicted RBP0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 CACNA1CQ13936 2221 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 NSD1Q96L73 2696 aaPredicted RBP0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 WDFY4Q6ZS81 3184 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 CPDO75976 1380 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 MED23Q9ULK4 1368 aa0.03□□□□□ -2.4
RNU4-48P-201ENST00000365559 OVOS2A0A0G2JMS6 1433 aa0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 NCOR1O75376 2440 aa0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 DOPEY1Q5JWR5 2465 aa0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 PKD1L2Q7Z442 2459 aa0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.41
RNU4-48P-201ENST00000365559 SETD2Q9BYW2 2564 aaPredicted RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 TEP1Q99973 2627 aaKnown RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 BIRC6Q9NR09 4857 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 SPEGQ15772 3267 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 C9JAW5 83 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 F2Z2F3 143 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 UQCRQO14949 82 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 SPINK1P00995 79 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 SLC25A5P05141 298 aaKnown RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 MPC1LP0DKB6 136 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 NEFHP12036 1026 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 HIST1H1BP16401 226 aaKnown RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 TFAMQ00059 246 aaKnown RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 TMEM128Q5BJH2 165 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 VMO1Q7Z5L0 202 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 TMEM141Q96I45 108 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 SLC35B3Q9H1N7 401 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 CENPHQ9H3R5 247 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 COA4Q9NYJ1 87 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 CALML5Q9NZT1 146 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 METTL1Q9UBP6 276 aaKnown RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 STAB2Q8WWQ8 2551 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 UNC80Q8N2C7 3258 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 ANKRD11Q6UB99 2663 aaPredicted RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 SZT2Q5T011 3432 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 AKAP13Q12802 2813 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 ARHGAP31Q2M1Z3 1444 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 LRP2P98164 4655 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 REV3LO60673 3130 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 EP300Q09472 2414 aaPredicted RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 MKI67P46013 3256 aaKnown RBP0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 DCHS1Q96JQ0 3298 aa0.02□□□□□ -2.41
RNU4-48P-201ENST00000365559 HECTD1Q9ULT8 2610 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 SIPA1L3O60292 1781 aaPredicted RBP0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 LAMB1P07942 1786 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 CSMD1Q96PZ7 3565 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 VWFP04275 2813 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 CELSR3Q9NYQ7 3312 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 ANKHD1Q8IWZ3 2542 aaKnown RBP0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 TRAV12-2A0A075B6T6 113 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 A0A096LNT2 108 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 TEX49A0A1B0GTD5 131 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 MCRIP1C9JLW8 97 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 ZNF670-ZNF695F2Z2N8 137 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 J3KT08 172 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 DPM2O94777 84 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 TFF1P04155 84 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 TCRAP04437 139 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 PAEPP09466 180 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 PYYP10082 97 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 S100A5P33763 92 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 AKR1D1P51857 326 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 PLGLB1Q02325 96 aa0.01□□□□□ -2.41
RNU4-48P-201ENST00000365559 Q5XG85 94 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms