RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 IGHV3-72A0A0B4J1Y9 119 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGHV3-66A0A0C4DH42 116 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 H3BT86 120 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 PANO1I0J062 215 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 BCE1O60756 84 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGHV3-11P01762 117 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 HBDP02042 147 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGLC6P0CF74 106 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 LINC00694P0DN24 101 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 MGST1P10620 155 aaKnown RBP3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 RPL7P18124 248 aaKnown RBP3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 UBE2D3P61077 147 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 UBE2D2P62837 147 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 CST6Q15828 149 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 LINC00643Q86TS7 51 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 AMELYQ99218 206 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 MGAMO43451 1857 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 LTBP1Q14766 1721 aa3.05□□□□□ -1.92
RNU1-87P-201ENST00000363727 TRPM6Q9BX84 2022 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 PLXNB3Q9ULL4 1909 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGHV1-45A0A0A0MS14 117 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGHV5-51A0A0C4DH38 117 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 TRBV6-1A0A0K0K1D8 114 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 F2Z2F3 143 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 RBP4P02753 201 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 P0DMU3 169 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 FAM231AP0DMU4 169 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 FAM231CP0DMU5 169 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 NPPCP23582 126 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 COL8A2P25067 703 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 GCHFRP30047 84 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 RBM11P57052 281 aaKnown RBP3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 CCL8P80075 99 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 RPL18Q07020 188 aaKnown RBP3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 ATXN8Q156A1 80 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 SP6Q3SY56 376 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 RNASE13Q5GAN3 156 aaKnown RBP3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 DEFB121Q5J5C9 76 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 HMGN2P46Q86SG4 172 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 EXOC3-AS1Q8N2X6 119 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 AICDAQ9GZX7 198 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 NHP2Q9NX24 153 aaKnown RBP3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 C21orf62Q9NYP8 219 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 TP73-AS1Q9UF72 201 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 BPTFQ12830 3046 aa3.04□□□□□ -1.92
RNU1-87P-201ENST00000363727 TRBV25-1A0A075B6N4 114 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 TRAV12-2A0A075B6T6 113 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGHV3OR15-7A0A075B7D8 119 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 TRAV13-1A0A0B4J241 112 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGHV5-10-1A0A0J9YXX1 117 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 A0A1B0GVX0 72 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 A0A1W2PQD3 144 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 LINC01546A6NGU7 62 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 NDUFC1O43677 76 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 PGLYRP1O75594 196 aaPredicted RBP3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 FSTL3O95633 263 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 LTAP01374 205 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGLV3-1P01715 115 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGKCP01834 107 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 IGHG2P01859 326 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 COX6CP09669 75 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 TLX1NBP0CAT3 122 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 PYYP10082 97 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 FXYD4P59646 89 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 DIAPH2-AS1Q14236 149 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 SPANXN5Q5MJ07 72 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 ORMDL3Q8N138 153 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 SPTSSAQ969W0 71 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 TRGV9Q99603 122 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 TTTY10Q9BZA0 68 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 NXT2Q9NPJ8 142 aaKnown RBP3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 LHFPL6Q9Y693 200 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 PTPRDP23468 1912 aa3.03□□□□□ -1.92
RNU1-87P-201ENST00000363727 OBSL1O75147 1896 aa3.03□□□□□ -1.93
RNU1-87P-201ENST00000363727 COL4A2P08572 1712 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 COL16A1Q07092 1604 aaPredicted RBP3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 TRBV20OR9-2A0A075B6H5 130 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 IGLV1-50A0A075B6I6 118 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 A0A0D9SEW6 157 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 HIGD1CA8MV81 97 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 SLC25A20O43772 301 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 IGHV4-34P06331 123 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 ARL14EPLP0DKL9 152 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 CD28P10747 220 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 NPC2P61916 151 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 LOXL1Q08397 574 aaPredicted RBP3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 EBI3Q14213 229 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 RPS19BP1Q86WX3 136 aaKnown RBP3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 MKXQ8IYA7 352 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 UBALD1Q8TB05 177 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 DPH3Q96FX2 82 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 IGF2BP2-AS1Q96M15 143 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 RPP21Q9H633 154 aaKnown RBP3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 AMMECR1Q9Y4X0 333 aaPredicted RBP3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 NLRC5Q86WI3 1866 aa3.02□□□□□ -1.93
RNU1-87P-201ENST00000363727 IGLV11-55A0A075B6I3 123 aa3.01□□□□□ -1.93
RNU1-87P-201ENST00000363727 IGHV3-49A0A0A0MS15 119 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms