RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ZNF479Q96JC4 524 aa8□□□□□ -1.13
SMC3-201ENST00000361804 RBAKDNA6NC62 111 aa8□□□□□ -1.13
SMC3-201ENST00000361804 RNF223E7ERA6 249 aa8□□□□□ -1.13
SMC3-201ENST00000361804 SRSF1Q07955 248 aaKnown RBP eCLIP8□□□□□ -1.13
SMC3-201ENST00000361804 C9orf47Q6ZRZ4 202 aa8□□□□□ -1.13
SMC3-201ENST00000361804 A0A087WWL8 130 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 TRAV41A0A0B4J266 112 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 TGFAP01135 160 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 BLCAPP62952 87 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 SRSF2Q01130 221 aaKnown RBP7.99□□□□□ -1.13
SMC3-201ENST00000361804 TMEM95Q3KNT9 176 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 DUSP14O95147 198 aaKnown RBP7.99□□□□□ -1.13
SMC3-201ENST00000361804 SUMO2P61956 95 aaKnown RBP7.99□□□□□ -1.13
SMC3-201ENST00000361804 CD300EQ496F6 205 aaPredicted RBP7.99□□□□□ -1.13
SMC3-201ENST00000361804 CHTOPQ9Y3Y2 248 aaKnown RBP7.99□□□□□ -1.13
SMC3-201ENST00000361804 PHLDA3Q9Y5J5 127 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 RPL39P62891 51 aaKnown RBP7.99□□□□□ -1.13
SMC3-201ENST00000361804 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 TM2D2Q9BX73 214 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 HIGD1BQ9P298 99 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 NOTCH3Q9UM47 2321 aa7.99□□□□□ -1.13
SMC3-201ENST00000361804 MYO18BQ8IUG5 2567 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 IGHV4-38-2P0DP08 117 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 HLA-DRB4P13762 266 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 SMAGPQ0VAQ4 97 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 C1orf122Q6ZSJ8 110 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 PIFOQ8TCI5 191 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 ITLN2Q8WWU7 325 aaPredicted RBP7.98□□□□□ -1.13
SMC3-201ENST00000361804 HLA-DRB4X5D2U9 266 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 C2orf66Q6UXQ4 117 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 TSSC4Q9Y5U2 329 aaPredicted RBP7.98□□□□□ -1.13
SMC3-201ENST00000361804 OOSP1A8MZH6 123 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 BAALCQ8WXS3 180 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 U3KQE9 123 aa7.98□□□□□ -1.13
SMC3-201ENST00000361804 E9PLD3 99 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 F8VRH5 84 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 ARL6IP6Q8N6S5 226 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 KLRB1Q12918 225 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 C10orf99Q6UWK7 81 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 PRADC1Q9BSG0 188 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 TRBV7-1A0A0A6YYK4 115 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 OR11H12B2RN74 326 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 LGALS1P09382 135 aaKnown RBP7.97□□□□□ -1.13
SMC3-201ENST00000361804 PF4V1P10720 104 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 RNASE3P12724 160 aaKnown RBP7.97□□□□□ -1.13
SMC3-201ENST00000361804 SLC25A16P16260 332 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 OR11H1Q8NG94 326 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 OR11H2Q8NH07 326 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 TLN2Q9Y4G6 2542 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 TRBV7-3A0A075B6L6 115 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 H7C1H1 209 aa7.97□□□□□ -1.13
SMC3-201ENST00000361804 OPRPNQ99935 248 aaPredicted RBP7.97□□□□□ -1.13
SMC3-201ENST00000361804 KMT2BQ9UMN6 2715 aaPredicted RBP7.96□□□□□ -1.13
SMC3-201ENST00000361804 FAM74A4Q5TZK3 123 aa7.96□□□□□ -1.13
SMC3-201ENST00000361804 FOXI2Q6ZQN5 318 aa7.96□□□□□ -1.13
SMC3-201ENST00000361804 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.13
SMC3-201ENST00000361804 CR1P17927 2039 aa7.96□□□□□ -1.13
SMC3-201ENST00000361804 OR10J6PQ8NGY7 276 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 SETD2Q9BYW2 2564 aaPredicted RBP7.96□□□□□ -1.14
SMC3-201ENST00000361804 CMYA5Q8N3K9 4069 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 TRAV12-2A0A075B6T6 113 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 AZU1P20160 251 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 RAB9AP51151 201 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 SPANXB1Q9NS25 103 aaPredicted RBP7.96□□□□□ -1.14
SMC3-201ENST00000361804 MYO9AB2RTY4 2548 aa7.96□□□□□ -1.14
SMC3-201ENST00000361804 ZNF815PA8K554 130 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 APOMO95445 188 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 TSHBP01222 138 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 ASIPP42127 132 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 SCGB2A2Q13296 93 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 KLK9Q2XQG4 91 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 MORN3Q6PF18 240 aaPredicted RBP7.95□□□□□ -1.14
SMC3-201ENST00000361804 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 KLK9Q9UKQ9 250 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 CRYGDP07320 174 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 ZFP2Q6ZN57 461 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 PTH2Q96A98 100 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 TOMM6Q96B49 74 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 SPAG8Q99932 426 aaPredicted RBP7.95□□□□□ -1.14
SMC3-201ENST00000361804 PGPEP1Q9NXJ5 209 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 SOCS3O14543 225 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 PLNP26678 52 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 SCGB1D4Q6XE38 83 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 LINC00477Q96M19 166 aa7.95□□□□□ -1.14
SMC3-201ENST00000361804 IGHV3-64A0A075B6Q5 118 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 TRAV12-3A0A0B4J271 114 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 IGHV4-61A0A0C4DH41 118 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 C11orf86A6NJI1 115 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 F5H697 171 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 H3BUX3 64 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 IGHV4-39P01824 125 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 C19orf54Q5BKX5 351 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 DPH3P1Q9H4G8 78 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 IGHV4-4A0A075B6R2 117 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 TP53TG1Q9Y2A0 90 aa7.94□□□□□ -1.14
SMC3-201ENST00000361804 FAM208BQ5VWN6 2430 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms