RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 MUC21A0A0G2JKD1 596 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 MUC21A0A140T8X8 626 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 LGALS9O00182 355 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 NCR2O95944 276 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 SYNJ2BPP57105 145 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 PSMG4Q5JS54 123 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 MUC21Q5SSG8 566 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 OR11H1Q8NG94 326 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 Q8TAT8 98 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 GLMPQ8WWB7 406 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 SMPXQ9UHP9 88 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 MAP1LC3AQ9H492 121 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 TP73-AS1Q9UF72 201 aa9.95□□□□□ -0.82
SQSTM1-201ENST00000360718 CD28P10747 220 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 RPL11P62913 178 aaKnown RBP9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 SEC11AP67812 179 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 IFI27L1Q96BM0 104 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 CNFNQ9BYD5 112 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 TSSC4Q9Y5U2 329 aaPredicted RBP9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 WNK1Q9H4A3 2382 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 NPYP01303 97 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 DUX3Q96PT4 197 aa9.94□□□□□ -0.82
SQSTM1-201ENST00000360718 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 HLA-DMBP28068 263 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 CACNG7P62955 275 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 TMEM97Q5BJF2 176 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 IGFL4Q6B9Z1 124 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 CBY3A6NI87 242 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 SIVA1O15304 175 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 PROK1P58294 105 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 C8orf86Q6ZUL3 223 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 C2orf91Q6ZV80 131 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 OR9G4Q8NGQ1 327 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 CITED2Q99967 270 aaPredicted RBP9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 PEMTQ9UBM1 199 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 SELENOKQ9Y6D0 94 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
SQSTM1-201ENST00000360718 A0A1W2PRX2 142 aa9.92□□□□□ -0.82
SQSTM1-201ENST00000360718 SLURP1P55000 103 aa9.92□□□□□ -0.82
SQSTM1-201ENST00000360718 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
SQSTM1-201ENST00000360718 LINC01546A6NGU7 62 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 KRTAP10-3P60369 221 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 ERCC8Q13216 396 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 BOD1L2Q8IYS8 172 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 MRPL53Q96EL3 112 aaKnown RBP9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 A6NDN8 102 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 SMIM15Q7Z3B0 74 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 RNF185Q96GF1 192 aa9.91□□□□□ -0.82
SQSTM1-201ENST00000360718 FCER1GP30273 86 aa9.9□□□□□ -0.82
SQSTM1-201ENST00000360718 TMEM78Q5T7P6 136 aa9.9□□□□□ -0.82
SQSTM1-201ENST00000360718 SAMD13Q5VXD3 122 aa9.9□□□□□ -0.82
SQSTM1-201ENST00000360718 CCL24O00175 119 aa9.9□□□□□ -0.83
SQSTM1-201ENST00000360718 SNAI2O43623 268 aa9.9□□□□□ -0.83
SQSTM1-201ENST00000360718 FGF6P10767 208 aa9.9□□□□□ -0.83
SQSTM1-201ENST00000360718 AMMECR1LQ6DCA0 310 aa9.9□□□□□ -0.83
SQSTM1-201ENST00000360718 CST9LQ9H4G1 147 aa9.9□□□□□ -0.83
SQSTM1-201ENST00000360718 IGKV3-7A0A075B6H7 116 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 PRAC2D3DTV9 90 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 TNFRSF6BO95407 300 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 HSD52Q0P140 79 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 ZNF575Q86XF7 245 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 RAX2Q96IS3 184 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 AP1S3Q96PC3 154 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 C7orf71A4D174 169 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 PRSS47A8MTI9 375 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 FXYD7P58549 80 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
SQSTM1-201ENST00000360718 LEPP41159 167 aa9.88□□□□□ -0.83
SQSTM1-201ENST00000360718 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.88□□□□□ -0.83
SQSTM1-201ENST00000360718 DLX4Q92988 240 aaPredicted RBP9.88□□□□□ -0.83
SQSTM1-201ENST00000360718 AGPAT4-IT1Q9H0P7 198 aa9.88□□□□□ -0.83
SQSTM1-201ENST00000360718 ATRQ13535 2644 aa9.88□□□□□ -0.83
SQSTM1-201ENST00000360718 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 ADARB2-AS1A8MUL3 147 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 H3BRM9 83 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 ID1P41134 155 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 K7ERU9 68 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 FHL3Q13643 280 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 RNF151Q2KHN1 245 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 ADAMTSL5Q6ZMM2 481 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 ERASQ7Z444 233 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 Q8N8P6 123 aa9.87□□□□□ -0.83
SQSTM1-201ENST00000360718 ATP5LO75964 103 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 NSUN5P1Q3KNT7 163 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 C9orf47Q6ZRZ4 202 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 IGKV3D-20A0A0C4DH25 116 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 PRSS1P07477 247 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 NMUP48645 174 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 NDUFA11Q86Y39 141 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 DYNLRB2Q8TF09 96 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 C18orf15Q96N68 181 aa9.86□□□□□ -0.83
SQSTM1-201ENST00000360718 SOCS3O14543 225 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms