RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 C11orf53Q8IXP5 236 aa14.31□□□□□ -0.12
SHANK1-202ENST00000359082 IGHV4-61A0A0C4DH41 118 aa14.3□□□□□ -0.12
SHANK1-202ENST00000359082 SPART-AS1P0CW21 52 aa14.3□□□□□ -0.12
SHANK1-202ENST00000359082 PKIGQ9Y2B9 76 aa14.3□□□□□ -0.12
SHANK1-202ENST00000359082 CDPF1Q6NVV7 123 aa14.3□□□□□ -0.12
SHANK1-202ENST00000359082 UBE2AP49459 152 aa14.3□□□□□ -0.12
SHANK1-202ENST00000359082 ATP5G1P05496 136 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 DAZ2Q13117 558 aaKnown RBP14.29□□□□□ -0.12
SHANK1-202ENST00000359082 DAZ4Q86SG3 579 aaKnown RBP14.29□□□□□ -0.12
SHANK1-202ENST00000359082 DAZ3Q9NR90 486 aaKnown RBP14.29□□□□□ -0.12
SHANK1-202ENST00000359082 TSC2P49815 1807 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 POU2AF1Q16633 256 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 VSIG2Q96IQ7 327 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 TANC1Q9C0D5 1861 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 IGLV3-1P01715 115 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 IGHV4OR15-8A0A075B7B6 117 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 A0A087WW49 117 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 IGHV7-81A0A0B4J1V7 117 aa14.29□□□□□ -0.12
SHANK1-202ENST00000359082 DOCK11Q5JSL3 2073 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 DEFB125Q8N687 156 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 DOCK9Q9BZ29 2069 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 I3L2K1 104 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 BLCAPP62952 87 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 SH2D6Q7Z4S9 175 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 HEATR1Q9H583 2144 aaKnown RBP14.28□□□□□ -0.12
SHANK1-202ENST00000359082 KIR2DL5BA0A0G2JN68 375 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 KIR2DL5BA0A0G2JPC4 375 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 KIR2DL5AQ8N109 375 aa14.28□□□□□ -0.12
SHANK1-202ENST00000359082 MSRB1Q9NZV6 116 aa14.27□□□□□ -0.12
SHANK1-202ENST00000359082 KIAA2026Q5HYC2 2103 aa14.27□□□□□ -0.12
SHANK1-202ENST00000359082 LINC00173Q6ZV60 143 aa14.27□□□□□ -0.12
SHANK1-202ENST00000359082 DEFB4AO15263 64 aa14.27□□□□□ -0.13
SHANK1-202ENST00000359082 A0A0J9YXV3 536 aa14.27□□□□□ -0.13
SHANK1-202ENST00000359082 PIP4P1Q86T03 277 aa14.27□□□□□ -0.13
SHANK1-202ENST00000359082 PLXNA4Q9HCM2 1894 aa14.27□□□□□ -0.13
SHANK1-202ENST00000359082 IGLL5B9A064 214 aa14.26□□□□□ -0.13
SHANK1-202ENST00000359082 NDUFB1O75438 58 aa14.26□□□□□ -0.13
SHANK1-202ENST00000359082 NRGNQ92686 78 aa14.26□□□□□ -0.13
SHANK1-202ENST00000359082 CACNA1GO43497 2377 aa14.26□□□□□ -0.13
SHANK1-202ENST00000359082 C14orf132Q9NPU4 83 aa14.26□□□□□ -0.13
SHANK1-202ENST00000359082 LENEPQ9Y5L5 61 aa14.26□□□□□ -0.13
SHANK1-202ENST00000359082 HELZP42694 1942 aaKnown RBP14.26□□□□□ -0.13
SHANK1-202ENST00000359082 RPL39P62891 51 aaKnown RBP14.25□□□□□ -0.13
SHANK1-202ENST00000359082 C16orf54Q6UWD8 224 aa14.25□□□□□ -0.13
SHANK1-202ENST00000359082 ACYP1P07311 99 aa14.25□□□□□ -0.13
SHANK1-202ENST00000359082 RNF152Q8N8N0 203 aa14.25□□□□□ -0.13
SHANK1-202ENST00000359082 HHLA3Q9XRX5 114 aa14.25□□□□□ -0.13
SHANK1-202ENST00000359082 A0A0B4J2C4 111 aa14.24□□□□□ -0.13
SHANK1-202ENST00000359082 NREPQ16612 68 aa14.24□□□□□ -0.13
SHANK1-202ENST00000359082 Q8N1Y9 231 aa14.24□□□□□ -0.13
SHANK1-202ENST00000359082 SEM1Q6ZVN7 128 aa14.24□□□□□ -0.13
SHANK1-202ENST00000359082 OPRPNQ99935 248 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-202ENST00000359082 A4D1N5 150 aa14.23□□□□□ -0.13
SHANK1-202ENST00000359082 K7EIM0 57 aa14.23□□□□□ -0.13
SHANK1-202ENST00000359082 PSMB8P28062 276 aa14.23□□□□□ -0.13
SHANK1-202ENST00000359082 IGLV11-55A0A075B6I3 123 aa14.23□□□□□ -0.13
SHANK1-202ENST00000359082 TMEM61Q8N0U2 210 aa14.23□□□□□ -0.13
SHANK1-202ENST00000359082 BAALCQ8WXS3 180 aa14.23□□□□□ -0.13
SHANK1-202ENST00000359082 FGF23Q9GZV9 251 aaPredicted RBP14.23□□□□□ -0.13
SHANK1-202ENST00000359082 MP68P56378 58 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 SMIM20Q8N5G0 67 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 FRMPD3Q5JV73 1810 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 C5orf56Q8N8D9 126 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 LYPD6BQ8NI32 183 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 CACNA1EQ15878 2313 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 NDUFA1O15239 70 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 PLXNA2O75051 1894 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 A0A1B0GX51 115 aa14.22□□□□□ -0.13
SHANK1-202ENST00000359082 PRAC2D3DTV9 90 aa14.21□□□□□ -0.13
SHANK1-202ENST00000359082 H0YGX0 51 aa14.21□□□□□ -0.13
SHANK1-202ENST00000359082 WT1P19544 449 aaPredicted RBP14.21□□□□□ -0.13
SHANK1-202ENST00000359082 MED12Q93074 2177 aa14.21□□□□□ -0.14
SHANK1-202ENST00000359082 CTSGP08311 255 aa14.21□□□□□ -0.14
SHANK1-202ENST00000359082 LINC01545Q5VT33 79 aa14.2□□□□□ -0.14
SHANK1-202ENST00000359082 PLXND1Q9Y4D7 1925 aa14.2□□□□□ -0.14
SHANK1-202ENST00000359082 SLX1AQ9BQ83 275 aa14.2□□□□□ -0.14
SHANK1-202ENST00000359082 INTS1Q8N201 2190 aaKnown RBP14.2□□□□□ -0.14
SHANK1-202ENST00000359082 ANKRD39Q53RE8 183 aa14.2□□□□□ -0.14
SHANK1-202ENST00000359082 PATE2Q6UY27 113 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 CLEC2BQ92478 149 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 NUPR1O60356 82 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 DEFB135Q30KP9 77 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 FANCD2OSQ96PS1 177 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 TRBV7-3A0A075B6L6 115 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 C2orf70A6NJV1 201 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 TOMM6Q96B49 74 aa14.19□□□□□ -0.14
SHANK1-202ENST00000359082 C4orf48Q5BLP8 95 aa14.18□□□□□ -0.14
SHANK1-202ENST00000359082 SPATA25Q9BR10 227 aa14.18□□□□□ -0.14
SHANK1-202ENST00000359082 COA6Q5JTJ3 125 aaKnown RBP14.18□□□□□ -0.14
SHANK1-202ENST00000359082 WFDC11Q8NEX6 87 aa14.18□□□□□ -0.14
SHANK1-202ENST00000359082 DEFB1P60022 68 aa14.18□□□□□ -0.14
SHANK1-202ENST00000359082 Q8N9W7 124 aa14.18□□□□□ -0.14
SHANK1-202ENST00000359082 WI2-2373I1.2A0A1W2PRP0 233 aa14.17□□□□□ -0.14
SHANK1-202ENST00000359082 IL15RAQ13261 267 aa14.17□□□□□ -0.14
SHANK1-202ENST00000359082 DOPEY2Q9Y3R5 2298 aa14.17□□□□□ -0.14
SHANK1-202ENST00000359082 FAM236AA0A1B0GUQ0 79 aa14.17□□□□□ -0.14
SHANK1-202ENST00000359082 FAM236BA0A1B0GV22 79 aa14.17□□□□□ -0.14
SHANK1-202ENST00000359082 LGALS9O00182 355 aa14.16□□□□□ -0.14
SHANK1-202ENST00000359082 NDUFC2O95298 119 aa14.16□□□□□ -0.14
SHANK1-202ENST00000359082 GTSF1Q8WW33 167 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms