RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 KIAA1644Q3SXP7 199 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 ANXA2RQ3ZCQ2 193 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 TMEM256Q8N2U0 113 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 AP1S3Q96PC3 154 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 C1QTNF4Q9BXJ3 329 aa7.98□□□□□ -1.13
TRAPPC4-201ENST00000359005 H3BVH4 76 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 INSP01308 110 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 IGKV3-20P01619 116 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 CD7P09564 240 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 OXLD1Q5BKU9 147 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 PDZD11Q5EBL8 140 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 PRR9Q5T870 116 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 GDF5OSQ5U4N7 250 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 HIST1H2BLQ99880 126 aa7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 ZNF256Q9Y2P7 627 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC4-201ENST00000359005 ZNF324O75467 553 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 SERF1AO75920 110 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 FRMD6-AS1P0C7T7 363 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 SPINK13Q1W4C9 94 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 BEAN1Q3B7T3 259 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 MUC21Q5SSG8 566 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 MORN3Q6PF18 240 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 GTSCR1Q86UQ5 136 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 LINC00482Q8N8I6 264 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 OR10D4PQ8NGN7 298 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 PRSS3P2Q8NHM4 247 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 PRELID3AQ96N28 172 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 LINC00467Q9BRT7 94 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 C11orf21Q9P2W6 132 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 ZMAT5Q9UDW3 170 aaKnown RBP7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 SELENOKQ9Y6D0 94 aa7.96□□□□□ -1.14
TRAPPC4-201ENST00000359005 CBY3A6NI87 242 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 KNCNA6PVL3 124 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 LINC00614P0C842 121 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 AMTP48728 403 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 S100A12P80511 92 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 PIK3CD-AS1Q5SR53 167 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 KPRPQ5T749 579 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 RNASEKQ6P5S7 137 aaKnown RBP7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 AMTNQ6UX39 209 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 LINC00518Q8N0U6 118 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 NDUFAF3Q9BU61 184 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 MAP1LC3AQ9H492 121 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 DPH3P1Q9H4G8 78 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 SCRT2Q9NQ03 307 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 TIMM8BQ9Y5J9 83 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 U3KQK5 164 aa7.95□□□□□ -1.14
TRAPPC4-201ENST00000359005 M0R2Z0 102 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 M0R381 172 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 DEFB1P60022 68 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 SSTP61278 116 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 ZNF415Q09FC8 603 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 IQCJQ1A5X6 159 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 MRPL51Q4U2R6 128 aaKnown RBP7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 NIT1Q86X76 327 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 AMN1Q8IY45 258 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 OR10AG1Q8NH19 301 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 C12orf57Q99622 126 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 SPXQ9BT56 116 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 TMEM208Q9BTX3 173 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 NXT2Q9NPJ8 142 aaKnown RBP7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 AP5S1Q9NUS5 200 aa7.94□□□□□ -1.14
TRAPPC4-201ENST00000359005 D6R8Y8 96 aa7.93□□□□□ -1.14
TRAPPC4-201ENST00000359005 NXPH4O95158 308 aa7.93□□□□□ -1.14
TRAPPC4-201ENST00000359005 G0S2P27469 103 aa7.93□□□□□ -1.14
TRAPPC4-201ENST00000359005 ODF3L2Q3SX64 289 aa7.93□□□□□ -1.14
TRAPPC4-201ENST00000359005 WFDC9Q8NEX5 89 aa7.93□□□□□ -1.14
TRAPPC4-201ENST00000359005 LINC01587Q99440 93 aa7.93□□□□□ -1.14
TRAPPC4-201ENST00000359005 GOLT1BQ9Y3E0 138 aa7.93□□□□□ -1.14
TRAPPC4-201ENST00000359005 TRAV12-2A0A075B6T6 113 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 IGHV3-16A0A0C4DH30 117 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 K7EMI3 77 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 GNRH2O43555 120 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 TRPT1Q86TN4 253 aaKnown RBP7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 PTH2Q96A98 100 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 GSN-AS1Q9NRJ2 163 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 HSPB8Q9UJY1 196 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 TP53TG3Q9ULZ0 132 aa7.92□□□□□ -1.14
TRAPPC4-201ENST00000359005 HUWE1Q7Z6Z7 4374 aaKnown RBP7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 MUC21A0A0G2JKD1 596 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 MUC21A0A140T8X8 626 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 C20orf202A1L168 122 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 LINC01549A6NIU2 74 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 H7C1H1 209 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 RNASE3P12724 160 aaKnown RBP7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 IGLL1P15814 213 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 JOSD1Q15040 202 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 Q8N1Y9 231 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 C9orf85Q96MD7 179 aa7.91□□□□□ -1.14
TRAPPC4-201ENST00000359005 IFITM10A6NMD0 228 aa7.9□□□□□ -1.14
TRAPPC4-201ENST00000359005 A8MWV9 139 aa7.9□□□□□ -1.14
TRAPPC4-201ENST00000359005 TCAPO15273 167 aa7.9□□□□□ -1.14
TRAPPC4-201ENST00000359005 SCGB1D1O95968 90 aa7.9□□□□□ -1.14
TRAPPC4-201ENST00000359005 EVI2AP22794 236 aa7.9□□□□□ -1.14
TRAPPC4-201ENST00000359005 ZNF575Q86XF7 245 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms