RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 CFHR3Q02985 330 aa12.75□□□□□ -0.37
PPP1CB-202ENST00000358506 PMVKQ15126 192 aa12.75□□□□□ -0.37
PPP1CB-202ENST00000358506 IGHV4OR15-8A0A075B7B6 117 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 A0A087WW49 117 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 C9orf47Q6ZRZ4 202 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 ABCA2Q9BZC7 2435 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 MLST8Q9BVC4 326 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 YPEL4Q96NS1 127 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 DNAL4O96015 105 aa12.74□□□□□ -0.37
PPP1CB-202ENST00000358506 K7EMT4 169 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 CFAP161Q6P656 301 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 TMEM141Q96I45 108 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 GAGE12JA6NER3 117 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 GAGE1Q13065 139 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 GAGE4Q13068 117 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 GAGE5Q13069 117 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 COX11Q9Y6N1 276 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 F8VRH5 84 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 AZU1P20160 251 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 MEGF9Q9H1U4 602 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 CCL24O00175 119 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 GPHB5Q86YW7 130 aa12.73□□□□□ -0.37
PPP1CB-202ENST00000358506 NPC2P61916 151 aa12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 UBE2V1Q13404 147 aa12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 TIMM21Q9BVV7 248 aa12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 USP9YO00507 2555 aaPredicted RBP12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 IGHV3-38A0A0C4DH36 116 aa12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 TLN2Q9Y4G6 2542 aa12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 A0A087WX48 190 aa12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 RNASE1P07998 156 aaKnown RBP12.72□□□□□ -0.37
PPP1CB-202ENST00000358506 NACAE9PAV3 2078 aa12.71□□□□□ -0.37
PPP1CB-202ENST00000358506 MALP21145 153 aa12.71□□□□□ -0.37
PPP1CB-202ENST00000358506 ZNF124Q15973 351 aa12.71□□□□□ -0.37
PPP1CB-202ENST00000358506 ZNF493Q6ZR52 646 aa12.71□□□□□ -0.37
PPP1CB-202ENST00000358506 ZNRF2Q8NHG8 242 aa12.71□□□□□ -0.37
PPP1CB-202ENST00000358506 ERG28Q9UKR5 140 aa12.71□□□□□ -0.37
PPP1CB-202ENST00000358506 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 GAGE12BA1L429 117 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 GAGE7O76087 117 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 GAGE12FP0CL80 117 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 GAGE12GP0CL81 117 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 GAGE12IP0CL82 117 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 HLA-DRB4P13762 266 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 CTRLP40313 264 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 ZNF80P51504 273 aaPredicted RBP12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 MORN3Q6PF18 240 aaPredicted RBP12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 APRG1Q8IVJ8 170 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 RPL39LQ96EH5 51 aaKnown RBP12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 HLA-DRB4X5D2U9 266 aa12.71□□□□□ -0.38
PPP1CB-202ENST00000358506 SORL1Q92673 2214 aa12.7□□□□□ -0.38
PPP1CB-202ENST00000358506 PAX2Q02962 417 aa12.7□□□□□ -0.38
PPP1CB-202ENST00000358506 A0A1B0GXF2 115 aa12.7□□□□□ -0.38
PPP1CB-202ENST00000358506 C2orf70A6NJV1 201 aa12.7□□□□□ -0.38
PPP1CB-202ENST00000358506 TSSC4Q9Y5U2 329 aaPredicted RBP12.7□□□□□ -0.38
PPP1CB-202ENST00000358506 MBD6Q96DN6 1003 aa12.7□□□□□ -0.38
PPP1CB-202ENST00000358506 C2CD3Q4AC94 2353 aa12.69□□□□□ -0.38
PPP1CB-202ENST00000358506 GDF5OSQ5U4N7 250 aa12.69□□□□□ -0.38
PPP1CB-202ENST00000358506 RASL10AQ92737 203 aa12.69□□□□□ -0.38
PPP1CB-202ENST00000358506 LOXL1Q08397 574 aaPredicted RBP12.69□□□□□ -0.38
PPP1CB-202ENST00000358506 LURAP1LQ8IV03 231 aa12.69□□□□□ -0.38
PPP1CB-202ENST00000358506 IGF1P05019 195 aa12.69□□□□□ -0.38
PPP1CB-202ENST00000358506 M0R2P5 195 aa12.68□□□□□ -0.38
PPP1CB-202ENST00000358506 ADAMTS20P59510 1910 aa12.68□□□□□ -0.38
PPP1CB-202ENST00000358506 PCP4P48539 62 aa12.68□□□□□ -0.38
PPP1CB-202ENST00000358506 LINC00158P58513 81 aa12.68□□□□□ -0.38
PPP1CB-202ENST00000358506 SPAG8Q99932 426 aaPredicted RBP12.68□□□□□ -0.38
PPP1CB-202ENST00000358506 TMEM89A2RUT3 159 aa12.67□□□□□ -0.38
PPP1CB-202ENST00000358506 SRSF2Q01130 221 aaKnown RBP12.67□□□□□ -0.38
PPP1CB-202ENST00000358506 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.67□□□□□ -0.38
PPP1CB-202ENST00000358506 MYCNOSP40205 109 aa12.67□□□□□ -0.38
PPP1CB-202ENST00000358506 Q8N6K4 173 aa12.67□□□□□ -0.38
PPP1CB-202ENST00000358506 PGPEP1Q9NXJ5 209 aa12.67□□□□□ -0.38
PPP1CB-202ENST00000358506 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
PPP1CB-202ENST00000358506 LINC01545Q5VT33 79 aa12.66□□□□□ -0.38
PPP1CB-202ENST00000358506 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 ZFAND3Q9H8U3 227 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 LAMA3Q16787 3333 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 IGHG4P01861 327 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 U3KQE9 123 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 BVES-AS1Q5T3Y7 98 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 PCP2Q8IVA1 136 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 BRCA2P51587 3418 aa12.65□□□□□ -0.38
PPP1CB-202ENST00000358506 SUMO4Q6EEV6 95 aa12.65□□□□□ -0.39
PPP1CB-202ENST00000358506 PRIMA1Q86XR5 153 aa12.65□□□□□ -0.39
PPP1CB-202ENST00000358506 Q8N1Y9 231 aa12.64□□□□□ -0.39
PPP1CB-202ENST00000358506 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
PPP1CB-202ENST00000358506 K7EMI3 77 aa12.64□□□□□ -0.39
PPP1CB-202ENST00000358506 ANKRD39Q53RE8 183 aa12.64□□□□□ -0.39
PPP1CB-202ENST00000358506 BPTFQ12830 3046 aa12.64□□□□□ -0.39
PPP1CB-202ENST00000358506 C3orf56Q8N813 242 aa12.63□□□□□ -0.39
PPP1CB-202ENST00000358506 A0A1W2PPR1 153 aa12.62□□□□□ -0.39
PPP1CB-202ENST00000358506 RBMY1BA6NDE4 496 aaKnown RBP12.62□□□□□ -0.39
PPP1CB-202ENST00000358506 RBMY1EA6NEQ0 496 aaKnown RBP12.62□□□□□ -0.39
PPP1CB-202ENST00000358506 CRPP02741 224 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms