RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 GAGE12BA1L429 117 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 A8MWL6 223 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 GAGE7O76087 117 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 GAGE12FP0CL80 117 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 GAGE12GP0CL81 117 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 GAGE12IP0CL82 117 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 MED14OSP0DP75 135 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 NANOS2P60321 138 aaKnown RBP10.87□□□□□ -0.67
TPM1-206ENST00000358278 LGALS9BQ3B8N2 356 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 CT83Q5H943 113 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 DNAH7Q8WXX0 4024 aa10.86□□□□□ -0.67
TPM1-206ENST00000358278 TRGV2A0A075B6R0 118 aa10.86□□□□□ -0.67
TPM1-206ENST00000358278 ZNF876PQ49A33 203 aa10.86□□□□□ -0.67
TPM1-206ENST00000358278 CARHSP1Q9Y2V2 147 aaKnown RBP10.86□□□□□ -0.67
TPM1-206ENST00000358278 V9GYV3 84 aa10.86□□□□□ -0.67
TPM1-206ENST00000358278 C12orf74Q32Q52 190 aa10.85□□□□□ -0.67
TPM1-206ENST00000358278 C10orf91Q5T1B1 145 aa10.85□□□□□ -0.67
TPM1-206ENST00000358278 A0A1W2PPQ1 181 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 MT-ND4LP03901 98 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 OR5AL1P0C617 328 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 IGLC6P0CF74 106 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 RNF212Q495C1 297 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 SYT8Q8NBV8 401 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 M0R381 172 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 PPP1R2P9O14990 202 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 SNAI2O43623 268 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 SPANXN1Q5VSR9 72 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 Q6ZTC4 211 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 ZFP82Q8N141 532 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 RASL10AQ92737 203 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 WWC2-AS2Q96NR7 200 aa10.84□□□□□ -0.67
TPM1-206ENST00000358278 MUC21A0A0G2JKD1 596 aa10.83□□□□□ -0.68
TPM1-206ENST00000358278 MUC21A0A140T8X8 626 aa10.83□□□□□ -0.68
TPM1-206ENST00000358278 F2Z2F3 143 aa10.83□□□□□ -0.68
TPM1-206ENST00000358278 APOC3P02656 99 aa10.83□□□□□ -0.68
TPM1-206ENST00000358278 SSTP61278 116 aa10.83□□□□□ -0.68
TPM1-206ENST00000358278 SSBP4Q9BWG4 385 aaPredicted RBP10.83□□□□□ -0.68
TPM1-206ENST00000358278 LYZL1Q6UWQ5 148 aa10.82□□□□□ -0.68
TPM1-206ENST00000358278 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
TPM1-206ENST00000358278 ANAPC16Q96DE5 110 aa10.82□□□□□ -0.68
TPM1-206ENST00000358278 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
TPM1-206ENST00000358278 HIGD1CA8MV81 97 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 HTN3P15516 51 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 CTRLP40313 264 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 PTH2Q96A98 100 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 CSMD3Q7Z407 3707 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 FAM231BA6NCW3 169 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 ATP5G1P05496 136 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 PIK3CD-AS1Q5SR53 167 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
TPM1-206ENST00000358278 ATP6V1G1O75348 118 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 CACNG7P62955 275 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 SVBPQ8N300 66 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 OR4C5Q8NGB2 326 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 BORCS7Q96B45 105 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 C18orf15Q96N68 181 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 NAT8BQ9UHF3 227 aa10.8□□□□□ -0.68
TPM1-206ENST00000358278 TRAV10A0A0B4J240 114 aa10.79□□□□□ -0.68
TPM1-206ENST00000358278 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
TPM1-206ENST00000358278 A8MWV9 139 aa10.79□□□□□ -0.68
TPM1-206ENST00000358278 NXPH4O95158 308 aa10.79□□□□□ -0.68
TPM1-206ENST00000358278 RHEBQ15382 184 aa10.79□□□□□ -0.68
TPM1-206ENST00000358278 CLRN3Q8NCR9 226 aa10.79□□□□□ -0.68
TPM1-206ENST00000358278 DEFB131BA0A096LNP1 70 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 SNAPINO95295 136 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
TPM1-206ENST00000358278 MUC7Q8TAX7 377 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
TPM1-206ENST00000358278 CFAP126Q5VTH2 177 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 NUP35Q8NFH5 326 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 AP1S3Q96PC3 154 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 CTDSP1Q9GZU7 261 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 JPT2Q9H910 190 aa10.78□□□□□ -0.68
TPM1-206ENST00000358278 TENM2Q9NT68 2774 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 C7orf77A4D0Y5 90 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 F5H768 121 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 RS1O15537 224 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 NTF3P20783 257 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 TWIST1Q15672 202 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 FAM74A4Q5TZK3 123 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 POM121L12Q8N7R1 296 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 ZNF479Q96JC4 524 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 RPS10P5Q9NQ39 176 aa10.77□□□□□ -0.69
TPM1-206ENST00000358278 TRGV4A0A0C4DH28 118 aa10.76□□□□□ -0.69
TPM1-206ENST00000358278 A0A1B0GUT8 65 aa10.76□□□□□ -0.69
TPM1-206ENST00000358278 WDR73Q6P4I2 378 aa10.76□□□□□ -0.69
TPM1-206ENST00000358278 MSRB1Q9NZV6 116 aa10.76□□□□□ -0.69
TPM1-206ENST00000358278 IGHV4-4A0A075B6R2 117 aa10.75□□□□□ -0.69
TPM1-206ENST00000358278 A0A087WWL8 130 aa10.75□□□□□ -0.69
TPM1-206ENST00000358278 IGHV3-73A0A0B4J1V6 119 aa10.75□□□□□ -0.69
TPM1-206ENST00000358278 TRGC1P0CF51 173 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms