RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TSKUQ8WUA8 353 aa18.09■□□□□ 0.49
SSBP3-202ENST00000357475 SSBP4Q9BWG4 385 aaPredicted RBP18.09■□□□□ 0.49
SSBP3-202ENST00000357475 XKRY2A2RUG3 117 aa18.08■□□□□ 0.49
SSBP3-202ENST00000357475 A8MWL6 223 aa18.08■□□□□ 0.49
SSBP3-202ENST00000357475 SNAI2O43623 268 aa18.08■□□□□ 0.49
SSBP3-202ENST00000357475 MT-ND4LP03901 98 aa18.08■□□□□ 0.49
SSBP3-202ENST00000357475 TRGV1A0A0A0MS02 117 aa18.08■□□□□ 0.48
SSBP3-202ENST00000357475 ATRAIDQ6UW56 229 aa18.08■□□□□ 0.48
SSBP3-202ENST00000357475 LYZL1Q6UWQ5 148 aa18.08■□□□□ 0.48
SSBP3-202ENST00000357475 EDA2RQ9HAV5 297 aa18.08■□□□□ 0.48
SSBP3-202ENST00000357475 GAGE12BA1L429 117 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 GAGE7O76087 117 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 GAGE12FP0CL80 117 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 GAGE12GP0CL81 117 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 GAGE12IP0CL82 117 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 MED14OSP0DP75 135 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 SVBPQ8N300 66 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 SPXQ9BT56 116 aa18.07■□□□□ 0.48
SSBP3-202ENST00000357475 M0R2P5 195 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 OR5AL1P0C617 328 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 DEFB130BP0DP73 79 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 DEFB130AP0DP74 79 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 DMRTA1Q5VZB9 504 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 ANAPC16Q96DE5 110 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 PGLYRP4Q96LB8 373 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 PHLDA3Q9Y5J5 127 aa18.06■□□□□ 0.48
SSBP3-202ENST00000357475 SMIM27A0A1W2PRY6 76 aa18.05■□□□□ 0.48
SSBP3-202ENST00000357475 HIGD1CA8MV81 97 aa18.05■□□□□ 0.48
SSBP3-202ENST00000357475 PPP1R2P9O14990 202 aa18.05■□□□□ 0.48
SSBP3-202ENST00000357475 SPART-AS1P0CW21 52 aa18.05■□□□□ 0.48
SSBP3-202ENST00000357475 CTRLP40313 264 aa18.05■□□□□ 0.48
SSBP3-202ENST00000357475 LYRM9A8MSI8 78 aa18.04■□□□□ 0.48
SSBP3-202ENST00000357475 M0R381 172 aa18.04■□□□□ 0.48
SSBP3-202ENST00000357475 ZNF876PQ49A33 203 aa18.04■□□□□ 0.48
SSBP3-202ENST00000357475 LINC00612Q8N6U2 182 aa18.04■□□□□ 0.48
SSBP3-202ENST00000357475 RPS10P5Q9NQ39 176 aa18.04■□□□□ 0.48
SSBP3-202ENST00000357475 NACAE9PAV3 2078 aa18.04■□□□□ 0.48
SSBP3-202ENST00000357475 CXorf65A6NEN9 183 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 SNAPINO95295 136 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 NANOS2P60321 138 aaKnown RBP18.03■□□□□ 0.48
SSBP3-202ENST00000357475 RHEBQ15382 184 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 C12orf74Q32Q52 190 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 GFRA4Q9GZZ7 299 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 MSRB1Q9NZV6 116 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 A0A1W2PPQ1 181 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 FOXA3P55318 350 aaPredicted RBP18.03■□□□□ 0.48
SSBP3-202ENST00000357475 NUP35Q8NFH5 326 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 RASL10AQ92737 203 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 JPT2Q9H910 190 aa18.03■□□□□ 0.48
SSBP3-202ENST00000357475 LGALS9BQ3B8N2 356 aa18.02■□□□□ 0.47
SSBP3-202ENST00000357475 C11orf45Q8TAV5 145 aa18.02■□□□□ 0.47
SSBP3-202ENST00000357475 ATP6V1G1O75348 118 aa18.01■□□□□ 0.47
SSBP3-202ENST00000357475 NXPH4O95158 308 aa18.01■□□□□ 0.47
SSBP3-202ENST00000357475 FAM231BA6NCW3 169 aa18■□□□□ 0.47
SSBP3-202ENST00000357475 FAM3BP58499 235 aaPredicted RBP18■□□□□ 0.47
SSBP3-202ENST00000357475 SPANXN1Q5VSR9 72 aa18■□□□□ 0.47
SSBP3-202ENST00000357475 POM121L12Q8N7R1 296 aa18■□□□□ 0.47
SSBP3-202ENST00000357475 CTDSP1Q9GZU7 261 aa18■□□□□ 0.47
SSBP3-202ENST00000357475 A0A087WWC5 75 aa17.99■□□□□ 0.47
SSBP3-202ENST00000357475 F2Z2F3 143 aa17.99■□□□□ 0.47
SSBP3-202ENST00000357475 DAD1P61803 113 aa17.99■□□□□ 0.47
SSBP3-202ENST00000357475 ZFP82Q8N141 532 aa17.99■□□□□ 0.47
SSBP3-202ENST00000357475 PTH2Q96A98 100 aa17.99■□□□□ 0.47
SSBP3-202ENST00000357475 NAT8BQ9UHF3 227 aa17.99■□□□□ 0.47
SSBP3-202ENST00000357475 NTF3P20783 257 aa17.98■□□□□ 0.47
SSBP3-202ENST00000357475 Q6ZTC4 211 aa17.98■□□□□ 0.47
SSBP3-202ENST00000357475 TRGV2A0A075B6R0 118 aa17.98■□□□□ 0.47
SSBP3-202ENST00000357475 IGHV3-53P01767 116 aa17.98■□□□□ 0.47
SSBP3-202ENST00000357475 CNFNQ9BYD5 112 aa17.98■□□□□ 0.47
SSBP3-202ENST00000357475 SAMD10Q9BYL1 202 aa17.98■□□□□ 0.47
SSBP3-202ENST00000357475 DNAH7Q8WXX0 4024 aa17.97■□□□□ 0.47
SSBP3-202ENST00000357475 SYT8Q8NBV8 401 aa17.97■□□□□ 0.47
SSBP3-202ENST00000357475 IGHV4-4A0A075B6R2 117 aa17.96■□□□□ 0.47
SSBP3-202ENST00000357475 TMEM242Q9NWH2 141 aa17.96■□□□□ 0.47
SSBP3-202ENST00000357475 TEX48A0A1B0GUV7 120 aa17.95■□□□□ 0.46
SSBP3-202ENST00000357475 CACNG7P62955 275 aa17.95■□□□□ 0.46
SSBP3-202ENST00000357475 CFAP126Q5VTH2 177 aa17.95■□□□□ 0.46
SSBP3-202ENST00000357475 ZNF479Q96JC4 524 aa17.95■□□□□ 0.46
SSBP3-202ENST00000357475 RS1O15537 224 aa17.94■□□□□ 0.46
SSBP3-202ENST00000357475 TWIST1Q15672 202 aa17.94■□□□□ 0.46
SSBP3-202ENST00000357475 URGCP-MRPS24S4R325 110 aa17.94■□□□□ 0.46
SSBP3-202ENST00000357475 A0A087WWL8 130 aa17.93■□□□□ 0.46
SSBP3-202ENST00000357475 IGHV3-73A0A0B4J1V6 119 aa17.93■□□□□ 0.46
SSBP3-202ENST00000357475 A0A1B0GUT8 65 aa17.93■□□□□ 0.46
SSBP3-202ENST00000357475 PIK3CD-AS1Q5SR53 167 aa17.93■□□□□ 0.46
SSBP3-202ENST00000357475 MRPL54Q6P161 138 aaKnown RBP17.93■□□□□ 0.46
SSBP3-202ENST00000357475 WDR73Q6P4I2 378 aa17.93■□□□□ 0.46
SSBP3-202ENST00000357475 C18orf15Q96N68 181 aa17.93■□□□□ 0.46
SSBP3-202ENST00000357475 HTN3P15516 51 aa17.92■□□□□ 0.46
SSBP3-202ENST00000357475 HOXA5P20719 270 aa17.92■□□□□ 0.46
SSBP3-202ENST00000357475 C14orf178Q8N769 122 aaPredicted RBP17.92■□□□□ 0.46
SSBP3-202ENST00000357475 IMMP2LQ96T52 175 aa17.92■□□□□ 0.46
SSBP3-202ENST00000357475 TRAV4A0A0B4J268 109 aa17.91■□□□□ 0.46
SSBP3-202ENST00000357475 CRYGDP07320 174 aa17.91■□□□□ 0.46
SSBP3-202ENST00000357475 EVI2AP22794 236 aa17.91■□□□□ 0.46
SSBP3-202ENST00000357475 OR4C5Q8NGB2 326 aa17.91■□□□□ 0.46
SSBP3-202ENST00000357475 FAM74A4Q5TZK3 123 aa17.9■□□□□ 0.46
SSBP3-202ENST00000357475 UFSP1Q6NVU6 142 aa17.9■□□□□ 0.46
SSBP3-202ENST00000357475 BORCS7Q96B45 105 aa17.9■□□□□ 0.46
SSBP3-202ENST00000357475 NDUFAF3Q9BU61 184 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms