RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 CADP27708 2225 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 Q8NFD4 153 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 TDRG1Q3Y452 100 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 ZNF503Q96F45 646 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 SPART-AS1P0CW21 52 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 DEFB113Q30KQ7 82 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 DIRC1Q969H9 104 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 IGLV3-9A0A075B6K5 115 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 A0A096LPF7 62 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 WDR86Q86TI4 376 aa10.03□□□□□ -0.8
SMC4-202ENST00000357388 C16orf74Q96GX8 76 aa10.02□□□□□ -0.8
SMC4-202ENST00000357388 TPSG1Q9NRR2 321 aa10.02□□□□□ -0.8
SMC4-202ENST00000357388 NDUFA11Q86Y39 141 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 UPK3BQ9BT76 320 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 NDUFC1O43677 76 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 C16orf54Q6UWD8 224 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 Q6ZR03 302 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.81
SMC4-202ENST00000357388 MYO7BQ6PIF6 2116 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 GATA1P15976 413 aaPredicted RBP10.02□□□□□ -0.81
SMC4-202ENST00000357388 TIRAPP58753 221 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 C5orf38Q86SI9 138 aa10.02□□□□□ -0.81
SMC4-202ENST00000357388 NYNRINQ9P2P1 1898 aaKnown RBP10.02□□□□□ -0.81
SMC4-202ENST00000357388 CLPSL2Q6UWE3 100 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 TET1Q8NFU7 2136 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 CTRLP40313 264 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 DEFB112Q30KQ8 113 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 C4orf48Q5BLP8 95 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 Q9HAA7 133 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 NOP10Q9NPE3 64 aaKnown RBP10.01□□□□□ -0.81
SMC4-202ENST00000357388 KLK5Q9Y337 293 aaPredicted RBP10.01□□□□□ -0.81
SMC4-202ENST00000357388 IGLV1-44P01699 117 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 ODF1Q14990 250 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 C17orf77Q96MU5 243 aa10.01□□□□□ -0.81
SMC4-202ENST00000357388 IGHV1-58A0A0C4DH39 117 aa10□□□□□ -0.81
SMC4-202ENST00000357388 A0A0J9YY99 117 aa10□□□□□ -0.81
SMC4-202ENST00000357388 FREM3P0C091 2139 aa10□□□□□ -0.81
SMC4-202ENST00000357388 IL17DQ8TAD2 202 aa10□□□□□ -0.81
SMC4-202ENST00000357388 TM2D2Q9BX73 214 aa10□□□□□ -0.81
SMC4-202ENST00000357388 RIF1Q5UIP0 2472 aaKnown RBP10□□□□□ -0.81
SMC4-202ENST00000357388 DOCK6Q96HP0 2047 aa10□□□□□ -0.81
SMC4-202ENST00000357388 K7ERS5 55 aa10□□□□□ -0.81
SMC4-202ENST00000357388 NDUFA1O15239 70 aa10□□□□□ -0.81
SMC4-202ENST00000357388 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
SMC4-202ENST00000357388 CLEC2BQ92478 149 aa10□□□□□ -0.81
SMC4-202ENST00000357388 FGF23Q9GZV9 251 aaPredicted RBP10□□□□□ -0.81
SMC4-202ENST00000357388 PRB1P04280 392 aa10□□□□□ -0.81
SMC4-202ENST00000357388 C9orf47Q6ZRZ4 202 aa10□□□□□ -0.81
SMC4-202ENST00000357388 IGHV4-4A0A075B6R2 117 aa9.99□□□□□ -0.81
SMC4-202ENST00000357388 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
SMC4-202ENST00000357388 DIDO1Q9BTC0 2240 aaKnown RBP9.99□□□□□ -0.81
SMC4-202ENST00000357388 PRSS33Q8NF86 280 aa9.99□□□□□ -0.81
SMC4-202ENST00000357388 WISP1O95388 367 aa9.98□□□□□ -0.81
SMC4-202ENST00000357388 MIAQ16674 131 aa9.98□□□□□ -0.81
SMC4-202ENST00000357388 TCL1BO95988 128 aa9.98□□□□□ -0.81
SMC4-202ENST00000357388 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
SMC4-202ENST00000357388 PRR15LQ9BU68 103 aa9.98□□□□□ -0.81
SMC4-202ENST00000357388 MPDZO75970 2070 aa9.98□□□□□ -0.81
SMC4-202ENST00000357388 IGHV4-59P01825 116 aa9.97□□□□□ -0.81
SMC4-202ENST00000357388 IMUPQ9GZP8 106 aa9.97□□□□□ -0.81
SMC4-202ENST00000357388 COL4A1P02462 1669 aa9.97□□□□□ -0.81
SMC4-202ENST00000357388 BPY2O14599 106 aa9.97□□□□□ -0.81
SMC4-202ENST00000357388 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
SMC4-202ENST00000357388 HEATR1Q9H583 2144 aaKnown RBP9.97□□□□□ -0.81
SMC4-202ENST00000357388 FANCMQ8IYD8 2048 aa9.96□□□□□ -0.81
SMC4-202ENST00000357388 MT-ATP8P03928 68 aa9.96□□□□□ -0.81
SMC4-202ENST00000357388 Q6ZQT7 251 aa9.96□□□□□ -0.81
SMC4-202ENST00000357388 NPBQ8NG41 125 aa9.96□□□□□ -0.81
SMC4-202ENST00000357388 GTSF1Q8WW33 167 aa9.96□□□□□ -0.81
SMC4-202ENST00000357388 FAM215AQ9Y5M1 114 aa9.96□□□□□ -0.81
SMC4-202ENST00000357388 TRAV23DV6A0A075B6W5 121 aa9.96□□□□□ -0.82
SMC4-202ENST00000357388 I3L2K1 104 aa9.96□□□□□ -0.82
SMC4-202ENST00000357388 HOXB4P17483 251 aaPredicted RBP9.96□□□□□ -0.82
SMC4-202ENST00000357388 FAM110AQ9BQ89 295 aa9.96□□□□□ -0.82
SMC4-202ENST00000357388 IGLC6P0CF74 106 aa9.96□□□□□ -0.82
SMC4-202ENST00000357388 SPTAN1Q13813 2472 aaKnown RBP9.95□□□□□ -0.82
SMC4-202ENST00000357388 LYRM9A8MSI8 78 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 COX7BP24311 80 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 C10orf105Q8TEF2 133 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 NCR3O14931 201 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 HIST2H2BDQ6DRA6 164 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 PIP4P1Q86T03 277 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 C20orf173Q96LM9 149 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
SMC4-202ENST00000357388 MPLKIPQ8TAP9 179 aa9.94□□□□□ -0.82
SMC4-202ENST00000357388 TRBV7-3A0A075B6L6 115 aa9.94□□□□□ -0.82
SMC4-202ENST00000357388 TEX22C9J3V5 150 aa9.94□□□□□ -0.82
SMC4-202ENST00000357388 PTH2Q96A98 100 aa9.94□□□□□ -0.82
SMC4-202ENST00000357388 NCOR1O75376 2440 aa9.94□□□□□ -0.82
SMC4-202ENST00000357388 DOCK10Q96BY6 2186 aa9.94□□□□□ -0.82
SMC4-202ENST00000357388 GYPEP15421 78 aa9.93□□□□□ -0.82
SMC4-202ENST00000357388 LRRC75A-AS1Q8N1F1 130 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms