RNA–Protein interactions for RNA: ENST00000357089.8

UBXN11-202, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBXN11, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-202ENST00000357089 TIMM8BQ9Y5J9 83 aaPredicted RBP10.56□□□□□ -0.72
UBXN11-202ENST00000357089 DNAH9Q9NYC9 4486 aa10.55□□□□□ -0.72
UBXN11-202ENST00000357089 XKRY2A2RUG3 117 aa10.55□□□□□ -0.72
UBXN11-202ENST00000357089 RPS20P60866 119 aaKnown RBP10.55□□□□□ -0.72
UBXN11-202ENST00000357089 V9GYV3 84 aa10.55□□□□□ -0.72
UBXN11-202ENST00000357089 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
UBXN11-202ENST00000357089 PLAC8L1A1L4L8 177 aa10.54□□□□□ -0.72
UBXN11-202ENST00000357089 SNURFLB1AK76 121 aa10.54□□□□□ -0.72
UBXN11-202ENST00000357089 H3BVH4 76 aa10.54□□□□□ -0.72
UBXN11-202ENST00000357089 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
UBXN11-202ENST00000357089 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
UBXN11-202ENST00000357089 A8MWL6 223 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 ARMS2P0C7Q2 107 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 HOXA5P20719 270 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 TCL1AP56279 114 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 CT83Q5H943 113 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 TPPP3Q9BW30 176 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 NOP10Q9NPE3 64 aaKnown RBP10.53□□□□□ -0.72
UBXN11-202ENST00000357089 URGCP-MRPS24S4R325 110 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 COL7A1Q02388 2944 aa10.53□□□□□ -0.72
UBXN11-202ENST00000357089 A0A0J9YWU9 116 aa10.52□□□□□ -0.72
UBXN11-202ENST00000357089 PPP1R2P9O14990 202 aa10.52□□□□□ -0.72
UBXN11-202ENST00000357089 S100PP25815 95 aa10.52□□□□□ -0.72
UBXN11-202ENST00000357089 DNLZQ5SXM8 178 aa10.52□□□□□ -0.72
UBXN11-202ENST00000357089 BTF3L4Q96K17 158 aa10.52□□□□□ -0.72
UBXN11-202ENST00000357089 IL36BQ9NZH7 164 aa10.52□□□□□ -0.72
UBXN11-202ENST00000357089 FER1L6-AS1Q8NA97 138 aa10.52□□□□□ -0.73
UBXN11-202ENST00000357089 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
UBXN11-202ENST00000357089 TSKUQ8WUA8 353 aa10.52□□□□□ -0.73
UBXN11-202ENST00000357089 C9orf85Q96MD7 179 aa10.52□□□□□ -0.73
UBXN11-202ENST00000357089 IMMP2LQ96T52 175 aa10.52□□□□□ -0.73
UBXN11-202ENST00000357089 GTSF1Q8WW33 167 aa10.51□□□□□ -0.73
UBXN11-202ENST00000357089 SPXQ9BT56 116 aa10.51□□□□□ -0.73
UBXN11-202ENST00000357089 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
UBXN11-202ENST00000357089 TENM3Q9P273 2699 aa10.51□□□□□ -0.73
UBXN11-202ENST00000357089 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 PHOX2AO14813 284 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BKO60814 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BJP06899 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 IGLC6P0CF74 106 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BOP23527 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BBP33778 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BDP58876 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 SSTP61278 116 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BCP62807 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST2H2BEQ16778 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.5□□□□□ -0.73
UBXN11-202ENST00000357089 FAM222AQ5U5X8 452 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BHQ93079 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BNQ99877 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 HIST1H2BMQ99879 126 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
UBXN11-202ENST00000357089 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 A0A1W2PPQ1 181 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 TRGC2P03986 189 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 OR5AL1P0C617 328 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 MED14OSP0DP75 135 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 LYZL1Q6UWQ5 148 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 PGLYRP4Q96LB8 373 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 GFRA4Q9GZZ7 299 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
UBXN11-202ENST00000357089 DKK2Q9UBU2 259 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 CELA1Q9UNI1 258 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 U3KQK5 164 aa10.49□□□□□ -0.73
UBXN11-202ENST00000357089 HIGD1CA8MV81 97 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 M0R2P5 195 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 M0R381 172 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 SNAI2O43623 268 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 SPINK4O60575 86 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 Q6ZTI0 123 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 OR10AG1Q8NH19 301 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 SSBP4Q9BWG4 385 aaPredicted RBP10.48□□□□□ -0.73
UBXN11-202ENST00000357089 KMT2CQ8NEZ4 4911 aaKnown RBP10.48□□□□□ -0.73
UBXN11-202ENST00000357089 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 LYRM9A8MSI8 78 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 F2Z2F3 143 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 DEFB130BP0DP73 79 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 DEFB130AP0DP74 79 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 FOXA3P55318 350 aaPredicted RBP10.48□□□□□ -0.73
UBXN11-202ENST00000357089 NDUFA6P56556 154 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 FAM3BP58499 235 aaPredicted RBP10.48□□□□□ -0.73
UBXN11-202ENST00000357089 SPANXN1Q5VSR9 72 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
UBXN11-202ENST00000357089 GAGE12BA1L429 117 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 GAGE7O76087 117 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 TRGC1P0CF51 173 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 LGALS9BQ3B8N2 356 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
UBXN11-202ENST00000357089 CTRLP40313 264 aa10.46□□□□□ -0.74
UBXN11-202ENST00000357089 SYT8Q8NBV8 401 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms