RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 LINC00527Q9UJ94 153 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 FOXG1P55316 489 aaPredicted RBP5.14□□□□□ -1.59
TRIM38-201ENST00000357085 LOXL1Q08397 574 aaPredicted RBP5.14□□□□□ -1.59
TRIM38-201ENST00000357085 Q8N1Y9 231 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 MDFICQ9P1T7 246 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 BRWD1-AS2P59051 145 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 FOXE3Q13461 319 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 DAZ1Q9NQZ3 744 aaKnown RBP5.14□□□□□ -1.59
TRIM38-201ENST00000357085 NDUFA12Q9UI09 145 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 PTPRQQ9UMZ3 2332 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 TRBV7-7A0A0K0K1E9 115 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 LINC00526Q96FQ7 95 aa5.14□□□□□ -1.59
TRIM38-201ENST00000357085 TEX49A0A1B0GTD5 131 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 I3L2K1 104 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 IGKV1-17P01599 117 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 CGB3P0DN86 165 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 CGB7P0DN87 165 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 PATE2Q6UY27 113 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 PPDPFQ9H3Y8 114 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 PAX8Q06710 450 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 WI2-2373I1.2A0A1W2PRP0 233 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 SMIM9A6NGZ8 99 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 IGLV2-23P01705 113 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 BSPH1Q075Z2 132 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 GFRALQ6UXV0 394 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 UBL5Q9BZL1 73 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 RNASE4P34096 147 aaKnown RBP5.13□□□□□ -1.59
TRIM38-201ENST00000357085 DAZAP2Q15038 168 aaPredicted RBP5.13□□□□□ -1.59
TRIM38-201ENST00000357085 PIK3CD-AS1Q5SR53 167 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 CGB1A6NKQ9 187 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 MNX1P50219 401 aaPredicted RBP5.13□□□□□ -1.59
TRIM38-201ENST00000357085 IGFL3Q6UXB1 125 aa5.13□□□□□ -1.59
TRIM38-201ENST00000357085 NDUFA4O00483 81 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 PHLDA1Q8WV24 401 aaPredicted RBP5.12□□□□□ -1.59
TRIM38-201ENST00000357085 CACNA1AO00555 2505 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 TLN2Q9Y4G6 2542 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 GATA3P23771 443 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 UCNP55089 124 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 ZNF491Q8N8L2 437 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 UBE2D1P51668 147 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 Q0VFX4 171 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 LINC00322Q6ZN03 302 aaPredicted RBP5.12□□□□□ -1.59
TRIM38-201ENST00000357085 NRGNQ92686 78 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 IGKV1D-37A0A075B6S9 117 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 EFNA4P52798 201 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 FAM74A4Q5TZK3 123 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 WT1P19544 449 aaPredicted RBP5.12□□□□□ -1.59
TRIM38-201ENST00000357085 DUX4L9Q6RFH8 374 aaPredicted RBP5.12□□□□□ -1.59
TRIM38-201ENST00000357085 NFE4Q86UQ8 179 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 C11orf44Q8N8P7 122 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 SPRR3Q9UBC9 169 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 TRAV4A0A0B4J268 109 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 ERCC8Q13216 396 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 C3orf56Q8N813 242 aa5.12□□□□□ -1.59
TRIM38-201ENST00000357085 TRAV26-2A0A0B4J265 109 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 MIAQ16674 131 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 C14orf178Q8N769 122 aaPredicted RBP5.11□□□□□ -1.59
TRIM38-201ENST00000357085 BAALCQ8WXS3 180 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 CEP295Q9C0D2 2601 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 TRBV7-3A0A075B6L6 115 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 DUX3Q96PT4 197 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 CD7P09564 240 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 MED13LQ71F56 2210 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 IGHV3-30P01768 117 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 IGHV3-30-5P0DP03 117 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 ZNF503-AS2A6NEH8 195 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 KNCNA6PVL3 124 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 ATP5J2P56134 94 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 SYNJ2BPP57105 145 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 RITA1Q96K30 269 aa5.11□□□□□ -1.59
TRIM38-201ENST00000357085 COX7A2LO14548 114 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 RBMY1FQ15415 496 aaKnown RBP5.1□□□□□ -1.59
TRIM38-201ENST00000357085 BPTFQ12830 3046 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 LINC00694P0DN24 101 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 PRO0461Q9UI25 63 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 IGLV11-55A0A075B6I3 123 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 TRAV41A0A0B4J266 112 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 ZNF876PQ49A33 203 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 VMO1Q7Z5L0 202 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 C9orf106Q8NAJ2 232 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 IGHV3-64A0A075B6Q5 118 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 EGR2P11161 476 aaPredicted RBP5.1□□□□□ -1.59
TRIM38-201ENST00000357085 IGF2-ASQ6U949 168 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 RNASE6Q93091 150 aaKnown RBP5.1□□□□□ -1.59
TRIM38-201ENST00000357085 C1orf43Q9BWL3 253 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 K7EIM0 57 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 INSP01308 110 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 DEFB109BQ30KR1 87 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 MUC7Q8TAX7 377 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 A4D1N5 150 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 SERP2Q8N6R1 65 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 HHLA3Q9XRX5 114 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 ZFP2Q6ZN57 461 aa5.1□□□□□ -1.59
TRIM38-201ENST00000357085 TRGV3P03979 118 aa5.09□□□□□ -1.59
TRIM38-201ENST00000357085 DIAPH2-AS1Q14236 149 aa5.09□□□□□ -1.59
TRIM38-201ENST00000357085 HES7Q9BYE0 225 aa5.09□□□□□ -1.59
TRIM38-201ENST00000357085 IGHV4OR15-8A0A075B7B6 117 aa5.09□□□□□ -1.59
TRIM38-201ENST00000357085 A0A087WW49 117 aa5.09□□□□□ -1.59
TRIM38-201ENST00000357085 LY6G6EA0A0G2JKS1 128 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms