RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 ZNF575Q86XF7 245 aa13.25□□□□□ -0.29
CDK11A-202ENST00000356937 A8MTW9 85 aa13.25□□□□□ -0.29
CDK11A-202ENST00000356937 RPS20P60866 119 aaKnown RBP13.25□□□□□ -0.29
CDK11A-202ENST00000356937 C19orf73Q9NVV2 129 aa13.25□□□□□ -0.29
CDK11A-202ENST00000356937 FAM231BA6NCW3 169 aa13.24□□□□□ -0.29
CDK11A-202ENST00000356937 DMRTA1Q5VZB9 504 aa13.24□□□□□ -0.29
CDK11A-202ENST00000356937 CFAP161Q6P656 301 aa13.24□□□□□ -0.29
CDK11A-202ENST00000356937 NUPR1O60356 82 aa13.23□□□□□ -0.29
CDK11A-202ENST00000356937 ANXA2RQ3ZCQ2 193 aa13.23□□□□□ -0.29
CDK11A-202ENST00000356937 FAM110AQ9BQ89 295 aa13.23□□□□□ -0.29
CDK11A-202ENST00000356937 FOXA3P55318 350 aaPredicted RBP13.23□□□□□ -0.29
CDK11A-202ENST00000356937 GTSCR1Q86UQ5 136 aa13.23□□□□□ -0.29
CDK11A-202ENST00000356937 MUC21A0A0G2JKD1 596 aa13.22□□□□□ -0.29
CDK11A-202ENST00000356937 MUC21A0A140T8X8 626 aa13.22□□□□□ -0.29
CDK11A-202ENST00000356937 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
CDK11A-202ENST00000356937 LYZL1Q6UWQ5 148 aa13.22□□□□□ -0.29
CDK11A-202ENST00000356937 Q6ZWC4 215 aa13.22□□□□□ -0.29
CDK11A-202ENST00000356937 VAMP8Q9BV40 100 aa13.22□□□□□ -0.29
CDK11A-202ENST00000356937 TRPT1Q86TN4 253 aaKnown RBP13.22□□□□□ -0.29
CDK11A-202ENST00000356937 FER1L6-AS1Q8NA97 138 aa13.22□□□□□ -0.29
CDK11A-202ENST00000356937 CRXO43186 299 aaPredicted RBP13.21□□□□□ -0.29
CDK11A-202ENST00000356937 DEFB125Q8N687 156 aa13.21□□□□□ -0.29
CDK11A-202ENST00000356937 ARMS2P0C7Q2 107 aa13.2□□□□□ -0.3
CDK11A-202ENST00000356937 CAMPP49913 170 aa13.2□□□□□ -0.3
CDK11A-202ENST00000356937 FAM159AQ6UWV7 190 aa13.2□□□□□ -0.3
CDK11A-202ENST00000356937 PKD1L1Q8TDX9 2849 aa13.2□□□□□ -0.3
CDK11A-202ENST00000356937 GNRH2O43555 120 aa13.2□□□□□ -0.3
CDK11A-202ENST00000356937 CLUHP3Q96NS8 147 aa13.2□□□□□ -0.3
CDK11A-202ENST00000356937 A0A1B0GUT8 65 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 RPL35AP18077 110 aaKnown RBP13.19□□□□□ -0.3
CDK11A-202ENST00000356937 TDRG1Q3Y452 100 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 OXLD1Q5BKU9 147 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 XCL2Q9UBD3 114 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 TIMM8BQ9Y5J9 83 aaPredicted RBP13.19□□□□□ -0.3
CDK11A-202ENST00000356937 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
CDK11A-202ENST00000356937 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
CDK11A-202ENST00000356937 BORCS7Q96B45 105 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 MDFIQ99750 246 aa13.19□□□□□ -0.3
CDK11A-202ENST00000356937 HBBP68871 147 aa13.18□□□□□ -0.3
CDK11A-202ENST00000356937 PRR31Q5SQ13 230 aa13.18□□□□□ -0.3
CDK11A-202ENST00000356937 ATP5L2Q7Z4Y8 100 aa13.18□□□□□ -0.3
CDK11A-202ENST00000356937 TP53TG3Q9ULZ0 132 aa13.18□□□□□ -0.3
CDK11A-202ENST00000356937 PAM16Q9Y3D7 125 aa13.18□□□□□ -0.3
CDK11A-202ENST00000356937 H3BVH4 76 aa13.18□□□□□ -0.3
CDK11A-202ENST00000356937 S100A4P26447 101 aaKnown RBP13.18□□□□□ -0.3
CDK11A-202ENST00000356937 A0A1B0GXF2 115 aa13.17□□□□□ -0.3
CDK11A-202ENST00000356937 WIPF1O43516 503 aa13.17□□□□□ -0.3
CDK11A-202ENST00000356937 ASIPP42127 132 aa13.17□□□□□ -0.3
CDK11A-202ENST00000356937 LINC00310P59036 64 aa13.17□□□□□ -0.3
CDK11A-202ENST00000356937 TMEM136Q6ZRR5 245 aa13.17□□□□□ -0.3
CDK11A-202ENST00000356937 HTN1P15515 57 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 CTRLP40313 264 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 RIGQ13278 110 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 COTL1Q14019 142 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 WDR73Q6P4I2 378 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 ORAOV1Q8WV07 137 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 KCNS1Q96KK3 526 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 GNB1LQ9BYB4 327 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 IGHV1OR15-1A0A075B7D0 117 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 Q0VG73 95 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 BATFQ16520 125 aa13.16□□□□□ -0.3
CDK11A-202ENST00000356937 SPRY2O43597 315 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 INSP01308 110 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 RASL11AQ6T310 242 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
CDK11A-202ENST00000356937 MRPL18Q9H0U6 180 aaKnown RBP13.15□□□□□ -0.3
CDK11A-202ENST00000356937 C20orf202A1L168 122 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 F2Z2F3 143 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 NTF3P20783 257 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 RBX1P62877 108 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 COX19Q49B96 90 aa13.15□□□□□ -0.3
CDK11A-202ENST00000356937 SERF1AO75920 110 aa13.14□□□□□ -0.31
CDK11A-202ENST00000356937 TWIST1Q15672 202 aa13.14□□□□□ -0.31
CDK11A-202ENST00000356937 Q8N1Y9 231 aa13.14□□□□□ -0.31
CDK11A-202ENST00000356937 OR10AG1Q8NH19 301 aa13.14□□□□□ -0.31
CDK11A-202ENST00000356937 CMYA5Q8N3K9 4069 aa13.14□□□□□ -0.31
CDK11A-202ENST00000356937 LINC01587Q99440 93 aa13.14□□□□□ -0.31
CDK11A-202ENST00000356937 MSRB1Q9NZV6 116 aa13.14□□□□□ -0.31
CDK11A-202ENST00000356937 CBY3A6NI87 242 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 PRM2P04554 102 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 UQCR10Q9UDW1 63 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 IGHV3OR16-12A0A075B7B8 117 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 K7EP13 123 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 MT-ND6P03923 174 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 OR5AL1P0C617 328 aa13.13□□□□□ -0.31
CDK11A-202ENST00000356937 RNASE3P12724 160 aaKnown RBP13.13□□□□□ -0.31
CDK11A-202ENST00000356937 ANK2Q01484 3957 aa13.12□□□□□ -0.31
CDK11A-202ENST00000356937 SNAI2O43623 268 aa13.12□□□□□ -0.31
CDK11A-202ENST00000356937 GIG44P09565 113 aaPredicted RBP13.12□□□□□ -0.31
CDK11A-202ENST00000356937 KIAA1644Q3SXP7 199 aa13.12□□□□□ -0.31
CDK11A-202ENST00000356937 SPANXN1Q5VSR9 72 aa13.12□□□□□ -0.31
CDK11A-202ENST00000356937 SAMD10Q9BYL1 202 aa13.12□□□□□ -0.31
CDK11A-202ENST00000356937 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
CDK11A-202ENST00000356937 SLAQ13239 276 aa13.11□□□□□ -0.31
CDK11A-202ENST00000356937 CNFNQ9BYD5 112 aa13.11□□□□□ -0.31
CDK11A-202ENST00000356937 PHLDA3Q9Y5J5 127 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms