RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SLC50A1Q9BRV3 221 aa7.7□□□□□ -1.18
PTPRA-203ENST00000356147 H7C2G1 150 aa7.7□□□□□ -1.18
PTPRA-203ENST00000356147 MT-ATP8P03928 68 aa7.7□□□□□ -1.18
PTPRA-203ENST00000356147 RPL39P62891 51 aaKnown RBP7.7□□□□□ -1.18
PTPRA-203ENST00000356147 SRSF2Q01130 221 aaKnown RBP7.7□□□□□ -1.18
PTPRA-203ENST00000356147 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
PTPRA-203ENST00000356147 Q6ZS46 218 aa7.7□□□□□ -1.18
PTPRA-203ENST00000356147 SPATA25Q9BR10 227 aa7.7□□□□□ -1.18
PTPRA-203ENST00000356147 TSPAN13O95857 204 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 IGHV3-11P01762 117 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 DOPEY2Q9Y3R5 2298 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 IGHV3-64A0A075B6Q5 118 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 TRAV26-1A0A087WT03 109 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 A0A1B0GV72 72 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 SAA4P35542 130 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 FOXI1Q12951 378 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 A0A087WWL8 130 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 C11orf86A6NJI1 115 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 TAL2Q16559 108 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 FAM110DQ8TAY7 271 aaPredicted RBP7.69□□□□□ -1.18
PTPRA-203ENST00000356147 KIR2DL4Q99706 377 aa7.69□□□□□ -1.18
PTPRA-203ENST00000356147 MUC4Q99102 2169 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 M0R1W7 72 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 TMEM190Q8WZ59 177 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 TOMM6Q96B49 74 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 NCOR2Q9Y618 2525 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 CSPG4Q6UVK1 2322 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 RBAKDNA6NC62 111 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 SPINK8P0C7L1 97 aa7.68□□□□□ -1.18
PTPRA-203ENST00000356147 OPRPNQ99935 248 aaPredicted RBP7.68□□□□□ -1.18
PTPRA-203ENST00000356147 RNF223E7ERA6 249 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 ORMDL2Q53FV1 153 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 PSMG4Q5JS54 123 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 CFAP126Q5VTH2 177 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 ZFAND2AQ8N6M9 145 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 DLX4Q92988 240 aaPredicted RBP7.67□□□□□ -1.18
PTPRA-203ENST00000356147 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 CRYGDP07320 174 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 EDN2P20800 178 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 C9orf47Q6ZRZ4 202 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 RAX2Q96IS3 184 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 TP53TG1Q9Y2A0 90 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 CHD8Q9HCK8 2581 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 TRAV12-1A0A0B4J245 112 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 F5H697 171 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 XGP55808 180 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 FAM74A4Q5TZK3 123 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 IGF2-ASQ6U949 168 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 EEF1AKMT3Q96AZ1 226 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 C1QTNF4Q9BXJ3 329 aa7.67□□□□□ -1.18
PTPRA-203ENST00000356147 HIVEP3Q5T1R4 2406 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 CSMD2Q7Z408 3487 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 A0A1W2PPR1 153 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 TCL1BO95988 128 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 TSHBP01222 138 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 IGKV3-20P01619 116 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 MRAP2Q96G30 205 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 DPH3P1Q9H4G8 78 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 GEMIN7Q9H840 131 aaKnown RBP7.66□□□□□ -1.18
PTPRA-203ENST00000356147 UBTD1Q9HAC8 227 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 SCGB1C2P0DMR2 95 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 ASIPP42127 132 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 GPHB5Q86YW7 130 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 CARD19Q96LW7 228 aa7.66□□□□□ -1.18
PTPRA-203ENST00000356147 GATA3P23771 443 aa7.65□□□□□ -1.18
PTPRA-203ENST00000356147 ZNF256Q9Y2P7 627 aaPredicted RBP7.65□□□□□ -1.18
PTPRA-203ENST00000356147 CRYBA4P53673 196 aa7.65□□□□□ -1.18
PTPRA-203ENST00000356147 EBI3Q14213 229 aa7.65□□□□□ -1.18
PTPRA-203ENST00000356147 BRD3OSQ6XYD6 125 aa7.65□□□□□ -1.18
PTPRA-203ENST00000356147 CELSR2Q9HCU4 2923 aa7.65□□□□□ -1.18
PTPRA-203ENST00000356147 IGHV4-4A0A075B6R2 117 aa7.65□□□□□ -1.19
PTPRA-203ENST00000356147 SCGB1A1P11684 91 aa7.65□□□□□ -1.19
PTPRA-203ENST00000356147 RNASE3P12724 160 aaKnown RBP7.65□□□□□ -1.19
PTPRA-203ENST00000356147 COX6B1P14854 86 aa7.65□□□□□ -1.19
PTPRA-203ENST00000356147 OR10J6PQ8NGY7 276 aa7.65□□□□□ -1.19
PTPRA-203ENST00000356147 AJUBAQ96IF1 538 aa7.65□□□□□ -1.19
PTPRA-203ENST00000356147 CD7P09564 240 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 UBE2D1P51668 147 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 FOXC1Q12948 553 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 LY6EQ16553 131 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 IGLV4-69A0A075B6H9 119 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 TRAV21A0A0B4J279 112 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 A0A0J9YY99 117 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 CRIP2P52943 208 aaPredicted RBP7.64□□□□□ -1.19
PTPRA-203ENST00000356147 NDUFA11Q86Y39 141 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 SIRPDQ9H106 197 aa7.64□□□□□ -1.19
PTPRA-203ENST00000356147 A6NJY4 79 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 CFC1P0CG37 223 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 MINOS1Q5TGZ0 78 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 TRPT1Q86TN4 253 aaKnown RBP7.63□□□□□ -1.19
PTPRA-203ENST00000356147 BEX4Q9NWD9 120 aaPredicted RBP7.63□□□□□ -1.19
PTPRA-203ENST00000356147 ZNF580Q9UK33 172 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 MINOS1-NBL1R4GNA1 71 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 TMEM95Q3KNT9 176 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 Q6ZUT4 128 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 ZNRF2Q8NHG8 242 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 CENPVL3A0A0U1RRI6 287 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms