RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 C10orf91Q5T1B1 145 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 UTF1Q5T230 341 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 LENEPQ9Y5L5 61 aa10.28□□□□□ -0.76
SCN8A-202ENST00000355133 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.76
SCN8A-202ENST00000355133 C5orf56Q8N8D9 126 aa10.27□□□□□ -0.77
SCN8A-202ENST00000355133 ATP6V0E2Q8NHE4 81 aa10.27□□□□□ -0.77
SCN8A-202ENST00000355133 ATP5G1P05496 136 aa10.27□□□□□ -0.77
SCN8A-202ENST00000355133 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.77
SCN8A-202ENST00000355133 K7EP34 96 aa10.27□□□□□ -0.77
SCN8A-202ENST00000355133 ZFP36P26651 326 aaKnown RBP10.27□□□□□ -0.77
SCN8A-202ENST00000355133 IGF2-ASQ6U949 168 aa10.27□□□□□ -0.77
SCN8A-202ENST00000355133 Q8N9W7 124 aa10.27□□□□□ -0.77
SCN8A-202ENST00000355133 H3BMG7 143 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 IL15RAQ13261 267 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 MRPL23Q16540 153 aaKnown RBP10.26□□□□□ -0.77
SCN8A-202ENST00000355133 CAMK2N2Q96S95 79 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 MALRD1Q5VYJ5 2156 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 TANC1Q9C0D5 1861 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 A0A1W2PPM0 123 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 KRTAP27-1Q3LI81 207 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 F8W1H4 67 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 IGKV1-17P01599 117 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 CCL18P55774 89 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
SCN8A-202ENST00000355133 RS1O15537 224 aa10.25□□□□□ -0.77
SCN8A-202ENST00000355133 ZNF747Q9BV97 191 aa10.25□□□□□ -0.77
SCN8A-202ENST00000355133 MSRB1Q9NZV6 116 aa10.25□□□□□ -0.77
SCN8A-202ENST00000355133 DEFB4AO15263 64 aa10.25□□□□□ -0.77
SCN8A-202ENST00000355133 GTF3C1Q12789 2109 aa10.25□□□□□ -0.77
SCN8A-202ENST00000355133 F8W735 103 aaPredicted RBP10.25□□□□□ -0.77
SCN8A-202ENST00000355133 C12orf74Q32Q52 190 aa10.25□□□□□ -0.77
SCN8A-202ENST00000355133 PATE2Q6UY27 113 aa10.25□□□□□ -0.77
SCN8A-202ENST00000355133 A0A1W2PNU3 283 aaPredicted RBP10.24□□□□□ -0.77
SCN8A-202ENST00000355133 SEM1Q6ZVN7 128 aa10.24□□□□□ -0.77
SCN8A-202ENST00000355133 SPANXA1Q9NS26 97 aa10.24□□□□□ -0.77
SCN8A-202ENST00000355133 CITED2Q99967 270 aaPredicted RBP10.24□□□□□ -0.77
SCN8A-202ENST00000355133 PCP2Q8IVA1 136 aa10.24□□□□□ -0.77
SCN8A-202ENST00000355133 NOTCH4Q99466 2003 aa10.24□□□□□ -0.77
SCN8A-202ENST00000355133 ETDCA0A1B0GVM5 59 aa10.24□□□□□ -0.77
SCN8A-202ENST00000355133 C2orf70A6NJV1 201 aa10.24□□□□□ -0.77
SCN8A-202ENST00000355133 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 ANAPC1Q9H1A4 1944 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 K7EP13 123 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 TIRAPP58753 221 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 RNF138Q8WVD3 245 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 Q8N7P7 452 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 ZNF503Q96F45 646 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 CREBBPQ92793 2442 aa10.23□□□□□ -0.77
SCN8A-202ENST00000355133 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 CFC1P0CG37 223 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 RNF152Q8N8N0 203 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 TEX48A0A1B0GUV7 120 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 DEFB1P60022 68 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 Q8N1Y9 231 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 C15orf53Q8NAA6 179 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 COX7A2LO14548 114 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 WISP2O76076 250 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 DAZAP2Q15038 168 aaPredicted RBP10.22□□□□□ -0.77
SCN8A-202ENST00000355133 DEFB135Q30KP9 77 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
SCN8A-202ENST00000355133 K7EMI3 77 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 HERV-K104P63124 156 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 ZFP2Q6ZN57 461 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 ORMDL1Q9P0S3 153 aa10.22□□□□□ -0.77
SCN8A-202ENST00000355133 MED13LQ71F56 2210 aa10.21□□□□□ -0.77
SCN8A-202ENST00000355133 ZGRF1Q86YA3 2104 aa10.21□□□□□ -0.77
SCN8A-202ENST00000355133 A0A0J9YXV3 536 aa10.21□□□□□ -0.77
SCN8A-202ENST00000355133 SIVA1O15304 175 aa10.21□□□□□ -0.77
SCN8A-202ENST00000355133 NPSP0C0P6 89 aa10.21□□□□□ -0.77
SCN8A-202ENST00000355133 DAZ2Q13117 558 aaKnown RBP10.21□□□□□ -0.78
SCN8A-202ENST00000355133 HIST2H2BCQ6DN03 193 aa10.21□□□□□ -0.78
SCN8A-202ENST00000355133 DAZ4Q86SG3 579 aaKnown RBP10.21□□□□□ -0.78
SCN8A-202ENST00000355133 DAZ3Q9NR90 486 aaKnown RBP10.21□□□□□ -0.78
SCN8A-202ENST00000355133 ZFHX2Q9C0A1 2572 aaPredicted RBP10.21□□□□□ -0.78
SCN8A-202ENST00000355133 IGHV4-28A0A0C4DH34 117 aa10.2□□□□□ -0.78
SCN8A-202ENST00000355133 TEX22C9J3V5 150 aa10.2□□□□□ -0.78
SCN8A-202ENST00000355133 HHLA3Q9XRX5 114 aa10.2□□□□□ -0.78
SCN8A-202ENST00000355133 DYSFO75923 2080 aa10.2□□□□□ -0.78
SCN8A-202ENST00000355133 CRYBA4P53673 196 aa10.2□□□□□ -0.78
SCN8A-202ENST00000355133 WI2-2373I1.2A0A1W2PRP0 233 aa10.19□□□□□ -0.78
SCN8A-202ENST00000355133 TIMM17AQ99595 171 aa10.19□□□□□ -0.78
SCN8A-202ENST00000355133 RPL39P62891 51 aaKnown RBP10.19□□□□□ -0.78
SCN8A-202ENST00000355133 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 EML6Q6ZMW3 1958 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 IFITM1P13164 125 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 LINC00173Q6ZV60 143 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 COX7B2Q8TF08 81 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 C4orf3Q8WVX3 66 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 TRACP01848 142 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 SH2D6Q7Z4S9 175 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 LYPD6BQ8NI32 183 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 E7EUB6 86 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 MYCNOSP40205 109 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
SCN8A-202ENST00000355133 TRBV12-3P01733 135 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 MED13Q9UHV7 2174 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 PRSS47A8MTI9 375 aa10.17□□□□□ -0.78
SCN8A-202ENST00000355133 DAND5Q8N907 189 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms