RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PRORYQ9H606 182 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 IGHV3-49A0A0A0MS15 119 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 SLC25A20O43772 301 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 SH2D1AO60880 128 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 TNFRSF6BO95407 300 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 OR11H6Q8NGC7 330 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 TMEM14CQ9P0S9 112 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 KLK5Q9Y337 293 aaPredicted RBP7.24□□□□□ -1.25
SMG6-202ENST00000354901 CELSR1Q9NYQ6 3014 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 SLC25A16P16260 332 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 C9orf153Q5TBE3 101 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 ATP6V0E2Q8NHE4 81 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 FANCD2OSQ96PS1 177 aa7.24□□□□□ -1.25
SMG6-202ENST00000354901 TRBV7-3A0A075B6L6 115 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 SPRY2O43597 315 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 ZNF56Q15929 161 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 ECSCRQ19T08 205 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 CFHR4Q92496 578 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 C21orf62Q9NYP8 219 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 OR13C6PQ8NH95 151 aa7.23□□□□□ -1.25
SMG6-202ENST00000354901 ATP5LO75964 103 aa7.22□□□□□ -1.25
SMG6-202ENST00000354901 SRSF2Q01130 221 aaKnown RBP7.22□□□□□ -1.25
SMG6-202ENST00000354901 PRADC1Q9BSG0 188 aa7.22□□□□□ -1.25
SMG6-202ENST00000354901 CSPG4Q6UVK1 2322 aa7.22□□□□□ -1.25
SMG6-202ENST00000354901 TEX49A0A1B0GTD5 131 aa7.22□□□□□ -1.25
SMG6-202ENST00000354901 LGALS1P09382 135 aaKnown RBP7.22□□□□□ -1.25
SMG6-202ENST00000354901 LYRM7Q5U5X0 104 aa7.22□□□□□ -1.25
SMG6-202ENST00000354901 VMO1Q7Z5L0 202 aa7.22□□□□□ -1.25
SMG6-202ENST00000354901 TRAV2A0A0B4J234 112 aa7.21□□□□□ -1.25
SMG6-202ENST00000354901 F5H768 121 aa7.21□□□□□ -1.26
SMG6-202ENST00000354901 LY6G5BQ8NDX9 201 aa7.21□□□□□ -1.26
SMG6-202ENST00000354901 RNF5Q99942 180 aa7.21□□□□□ -1.26
SMG6-202ENST00000354901 IGLV11-55A0A075B6I3 123 aa7.21□□□□□ -1.26
SMG6-202ENST00000354901 MRPS12O15235 138 aaKnown RBP7.21□□□□□ -1.26
SMG6-202ENST00000354901 ZFP36P26651 326 aaKnown RBP7.21□□□□□ -1.26
SMG6-202ENST00000354901 ADORA2A-AS1P86434 159 aa7.21□□□□□ -1.26
SMG6-202ENST00000354901 SRSF1Q07955 248 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMG6-202ENST00000354901 IGHV3-64A0A075B6Q5 118 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 OOSP1A8MZH6 123 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
SMG6-202ENST00000354901 EGR2P11161 476 aaPredicted RBP7.2□□□□□ -1.26
SMG6-202ENST00000354901 ERCC8Q13216 396 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 IGHV3OR16-10A0A075B7F0 116 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 HOXB4P17483 251 aaPredicted RBP7.2□□□□□ -1.26
SMG6-202ENST00000354901 ZNF80P51504 273 aaPredicted RBP7.2□□□□□ -1.26
SMG6-202ENST00000354901 TAL2Q16559 108 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 FAM19A5Q7Z5A7 132 aaPredicted RBP7.2□□□□□ -1.26
SMG6-202ENST00000354901 RNF182Q8N6D2 247 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 NRGNQ92686 78 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 C1orf43Q9BWL3 253 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 OVOL3O00110 214 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 SRD5A1P18405 259 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 HERVK_113P61574 105 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 ZNF493Q6ZR52 646 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 TMEM126AQ9H061 195 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 LINC00527Q9UJ94 153 aa7.2□□□□□ -1.26
SMG6-202ENST00000354901 DOPEY2Q9Y3R5 2298 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 Q8N1Y9 231 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 NPBQ8NG41 125 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
SMG6-202ENST00000354901 A0A1W2PPR1 153 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 G3V318 75 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 CTSGP08311 255 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 C15orf32Q32M92 178 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 OR10J6PQ8NGY7 276 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 CREBBPQ92793 2442 aa7.19□□□□□ -1.26
SMG6-202ENST00000354901 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 TRGV3P03979 118 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 PRR25Q96S07 402 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 ZNF256Q9Y2P7 627 aaPredicted RBP7.18□□□□□ -1.26
SMG6-202ENST00000354901 IGHV7-81A0A0B4J1V7 117 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 CENPVL3A0A0U1RRI6 287 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 PRAC2D3DTV9 90 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 RS1O15537 224 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 CD7P09564 240 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 LYPD1Q8N2G4 141 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 DUX3Q96PT4 197 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 ODF3BA8MYP8 253 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 NPFFO15130 113 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 CLEC19AQ6UXS0 136 aa7.18□□□□□ -1.26
SMG6-202ENST00000354901 M0R1W7 72 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 SMAD5-AS1Q9Y6J3 95 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 LAGE3Q14657 143 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 TMEM170BQ5T4T1 132 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 Q6ZS46 218 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 DTX2Q86UW9 622 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 TMEM219Q86XT9 240 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 NDUFA11Q86Y39 141 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 ZMAT4Q9H898 229 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 ATP6V0E1O15342 81 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 PLNP26678 52 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 PAX8Q06710 450 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 LY6DQ14210 128 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 U3KQK5 164 aa7.17□□□□□ -1.26
SMG6-202ENST00000354901 F8VRH5 84 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 H7C1H1 209 aa7.16□□□□□ -1.26
SMG6-202ENST00000354901 J3KT08 172 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms