RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 HRCT1Q6UXD1 115 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 SPTAN1Q13813 2472 aaKnown RBP7.85□□□□□ -1.15
COL11A1-201ENST00000353414 K7EP13 123 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 HHLA3Q9XRX5 114 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 BAALC-AS2P0C853 105 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 ORMDL1Q9P0S3 153 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 KLK12Q9UKR0 248 aa7.85□□□□□ -1.15
COL11A1-201ENST00000353414 WT1-ASQ06250 92 aa7.84□□□□□ -1.15
COL11A1-201ENST00000353414 SMIM20Q8N5G0 67 aa7.84□□□□□ -1.15
COL11A1-201ENST00000353414 KLK5Q9Y337 293 aaPredicted RBP7.84□□□□□ -1.15
COL11A1-201ENST00000353414 IGLV2-18A0A075B6J9 118 aa7.84□□□□□ -1.15
COL11A1-201ENST00000353414 A0A0J9YWU9 116 aa7.84□□□□□ -1.15
COL11A1-201ENST00000353414 WT1P19544 449 aaPredicted RBP7.84□□□□□ -1.15
COL11A1-201ENST00000353414 LHFPL1Q86WI0 220 aa7.84□□□□□ -1.15
COL11A1-201ENST00000353414 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.84□□□□□ -1.15
COL11A1-201ENST00000353414 ATP6V0E2Q8NHE4 81 aa7.84□□□□□ -1.15
COL11A1-201ENST00000353414 NTN5Q8WTR8 489 aaPredicted RBP7.84□□□□□ -1.15
COL11A1-201ENST00000353414 A0A1W2PPM0 123 aa7.84□□□□□ -1.15
COL11A1-201ENST00000353414 TNRC6AQ8NDV7 1962 aaKnown RBP7.84□□□□□ -1.15
COL11A1-201ENST00000353414 COX7A2LO14548 114 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 MLST8Q9BVC4 326 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 NBASA2RRP1 2371 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 A0A0U1RQV1 116 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 C17orf82Q86X59 251 aaPredicted RBP7.83□□□□□ -1.16
COL11A1-201ENST00000353414 FREM1Q5H8C1 2179 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 IGKV4-1P06312 121 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 SEC61GP60059 68 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 PDE6HQ13956 83 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 F8W1H4 67 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 K7EQD1 137 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 DEFB125Q8N687 156 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 OBSL1O75147 1896 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 IGLC3P0DOY3 106 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 FOXI2Q6ZQN5 318 aa7.83□□□□□ -1.16
COL11A1-201ENST00000353414 J3QQQ9 107 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 PRO1854Q9UHT4 67 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 K7EP34 96 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 FAM231DQ6ZW35 169 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 AJUBAQ96IF1 538 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 TRBV24-1A0A075B6N3 115 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 YPEL3P61236 119 aaPredicted RBP7.82□□□□□ -1.16
COL11A1-201ENST00000353414 DENND4CQ5VZ89 1909 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 LECT2O14960 151 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 QRFPP83859 136 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 BVES-AS1Q5T3Y7 98 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 C18orf32Q8TCD1 76 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 RETNQ9HD89 108 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 FAM215AQ9Y5M1 114 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 RBAKDNA6NC62 111 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 OR11H6Q8NGC7 330 aa7.82□□□□□ -1.16
COL11A1-201ENST00000353414 NOTCH4Q99466 2003 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 CRIPAKQ8N1N5 446 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 MRPL36Q9P0J6 103 aaKnown RBP7.81□□□□□ -1.16
COL11A1-201ENST00000353414 SLC25A29Q8N8R3 303 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 CENPVL3A0A0U1RRI6 287 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 LY6G6EA0A0G2JKS1 128 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 CCL25O15444 150 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 C16orf74Q96GX8 76 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 U3KQA8 63 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 A0A1B0GX51 115 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 PROK2Q9HC23 129 aa7.81□□□□□ -1.16
COL11A1-201ENST00000353414 ETV2O00321 342 aaPredicted RBP7.8□□□□□ -1.16
COL11A1-201ENST00000353414 SH2D6Q7Z4S9 175 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 INAFM1C9JVW0 142 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 FOXI1Q12951 378 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 GFRA4Q9GZZ7 299 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 CTSZQ9UBR2 303 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 FUSP35637 526 aaKnown RBP eCLIP7.8□□□□□ -1.16
COL11A1-201ENST00000353414 PRR20EP86478 221 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 PRR20CP86479 221 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 PRR20DP86480 221 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 PRR20BP86481 221 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 PRR20AP86496 221 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 CT83Q5H943 113 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 ATP5G1P05496 136 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 TEX22C9J3V5 150 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 LYPD6Q86Y78 171 aa7.8□□□□□ -1.16
COL11A1-201ENST00000353414 COL4A4P53420 1690 aaPredicted RBP7.79□□□□□ -1.16
COL11A1-201ENST00000353414 MED13LQ71F56 2210 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 NDUFB1O75438 58 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 PLA2G2CQ5R387 149 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 FXYD5Q96DB9 178 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 VSIG2Q96IQ7 327 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 SMAD5-AS1Q9Y6J3 95 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 IGFL3Q6UXB1 125 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 RPL39P62891 51 aaKnown RBP7.79□□□□□ -1.16
COL11A1-201ENST00000353414 Q6ZWC4 215 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 ZNF524Q96C55 264 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 ZFP2Q6ZN57 461 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 C9JQL5 133 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 IGKV1-17P01599 117 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 PSMB8P28062 276 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 POU2AF1Q16633 256 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 MUSTN1Q8IVN3 82 aa7.79□□□□□ -1.16
COL11A1-201ENST00000353414 TMEM131Q92545 1883 aa7.78□□□□□ -1.16
COL11A1-201ENST00000353414 WNK1Q9H4A3 2382 aa7.78□□□□□ -1.16
COL11A1-201ENST00000353414 ZNF726P1Q15940 193 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms