RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GFRALQ6UXV0 394 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 OR13C6PQ8NH95 151 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 ZZEF1O43149 2961 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 LGALS3P17931 250 aaKnown RBP10.09□□□□□ -0.79
IFT88-202ENST00000351808 CEP250Q9BV73 2442 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 M0R1B8 84 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 IGHV1-46P01743 117 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 LINC00311Q8N616 119 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 RNF182Q8N6D2 247 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 TEX36Q5VZQ5 186 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 METTL26Q96S19 204 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 SLC50A1Q9BRV3 221 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 TRBV30A0A0K0K1B3 111 aa10.08□□□□□ -0.8
IFT88-202ENST00000351808 CDX4O14627 284 aaPredicted RBP10.08□□□□□ -0.8
IFT88-202ENST00000351808 NTN3O00634 580 aaPredicted RBP10.07□□□□□ -0.8
IFT88-202ENST00000351808 C1orf162Q8NEQ5 155 aaPredicted RBP10.07□□□□□ -0.8
IFT88-202ENST00000351808 ZNF883P0CG24 379 aa10.07□□□□□ -0.8
IFT88-202ENST00000351808 DLX6P56179 175 aa10.07□□□□□ -0.8
IFT88-202ENST00000351808 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
IFT88-202ENST00000351808 GAGE2AQ6NT46 116 aa10.07□□□□□ -0.8
IFT88-202ENST00000351808 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
IFT88-202ENST00000351808 CLEC2BQ92478 149 aa10.07□□□□□ -0.8
IFT88-202ENST00000351808 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
IFT88-202ENST00000351808 H3BT86 120 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 IGHV3-23P01764 117 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 CCL8P80075 99 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 IGFBPL1Q8WX77 278 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 EEF1AKMT3Q96AZ1 226 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 IMUPQ9GZP8 106 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 M0R381 172 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 C9orf106Q8NAJ2 232 aa10.06□□□□□ -0.8
IFT88-202ENST00000351808 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.05□□□□□ -0.8
IFT88-202ENST00000351808 C17orf100A8MU93 164 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 AGPAT4-IT1Q9H0P7 198 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 RP1L1Q8IWN7 2480 aaPredicted RBP10.05□□□□□ -0.8
IFT88-202ENST00000351808 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 TRAV17A0A0B4J275 112 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 MGPP08493 103 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 UBE2E1P51965 193 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 DEFB121Q5J5C9 76 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 TMEM219Q86XT9 240 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 TP53TG1Q9Y2A0 90 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 SLC25A15Q9Y619 301 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 MGAQ8IWI9 3026 aa10.05□□□□□ -0.8
IFT88-202ENST00000351808 IGHV4-4A0A075B6R2 117 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 A0A0G2JNJ9 132 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 CD59P13987 128 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 RPL39P62891 51 aaKnown RBP10.04□□□□□ -0.8
IFT88-202ENST00000351808 MDS2Q8NDY4 140 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 SMCR5Q8TEV8 140 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 Q9UFV3 132 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 ZNF256Q9Y2P7 627 aaPredicted RBP10.04□□□□□ -0.8
IFT88-202ENST00000351808 MSRB2Q9Y3D2 182 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 TMEM223A0PJW6 202 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
IFT88-202ENST00000351808 LYPD2Q6UXB3 125 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 PRSS33Q8NF86 280 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 F5H768 121 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 ICOSQ9Y6W8 199 aa10.04□□□□□ -0.8
IFT88-202ENST00000351808 IGLV3-9A0A075B6K5 115 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 hADV29S1A0JD25 119 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 COX7CP15954 63 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 Q6ZSV7 163 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 PKDREJQ9NTG1 2253 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 CSMD1Q96PZ7 3565 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 POLEQ07864 2286 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 IGIPA6NJ69 53 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 C8orf31Q8N9H6 132 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
IFT88-202ENST00000351808 IGHV1-3A0A0C4DH29 117 aa10.02□□□□□ -0.8
IFT88-202ENST00000351808 MFAP4P55083 255 aa10.02□□□□□ -0.8
IFT88-202ENST00000351808 KIR2DL5BQ8NHK3 375 aa10.02□□□□□ -0.8
IFT88-202ENST00000351808 CYSTM1Q9H1C7 97 aa10.02□□□□□ -0.8
IFT88-202ENST00000351808 ZNF576Q9H609 170 aa10.02□□□□□ -0.8
IFT88-202ENST00000351808 F8W735 103 aaPredicted RBP10.02□□□□□ -0.81
IFT88-202ENST00000351808 IGHV1-8P0DP01 117 aa10.02□□□□□ -0.81
IFT88-202ENST00000351808 C4orf26Q17RF5 130 aa10.02□□□□□ -0.81
IFT88-202ENST00000351808 TRAV8-3A0A0A6YYJ7 113 aa10.01□□□□□ -0.81
IFT88-202ENST00000351808 PRSS2P07478 247 aa10.01□□□□□ -0.81
IFT88-202ENST00000351808 MAFAQ8NHW3 353 aaPredicted RBP10.01□□□□□ -0.81
IFT88-202ENST00000351808 ASPMQ8IZT6 3477 aa10.01□□□□□ -0.81
IFT88-202ENST00000351808 TMEM105Q8N8V8 129 aa10.01□□□□□ -0.81
IFT88-202ENST00000351808 CITED2Q99967 270 aaPredicted RBP10.01□□□□□ -0.81
IFT88-202ENST00000351808 NDUFB3O43676 98 aa10□□□□□ -0.81
IFT88-202ENST00000351808 COX6CP09669 75 aa10□□□□□ -0.81
IFT88-202ENST00000351808 C2orf48Q96LS8 159 aa10□□□□□ -0.81
IFT88-202ENST00000351808 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
IFT88-202ENST00000351808 IGHG3P01860 377 aa10□□□□□ -0.81
IFT88-202ENST00000351808 IGHV3-66A0A0C4DH42 116 aa10□□□□□ -0.81
IFT88-202ENST00000351808 ADARB2-AS1A8MUL3 147 aa10□□□□□ -0.81
IFT88-202ENST00000351808 OVOL1O14753 267 aa10□□□□□ -0.81
IFT88-202ENST00000351808 CRYGAP11844 174 aa10□□□□□ -0.81
IFT88-202ENST00000351808 LINC00643Q86TS7 51 aa10□□□□□ -0.81
IFT88-202ENST00000351808 ZNF580Q9UK33 172 aa10□□□□□ -0.81
IFT88-202ENST00000351808 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 LEPROTO15243 131 aa9.99□□□□□ -0.81
IFT88-202ENST00000351808 ZNF876PQ49A33 203 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms