RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 MSRB1Q9NZV6 116 aa13.72□□□□□ -0.21
PTN-201ENST00000348225 S100A2P29034 98 aa13.71□□□□□ -0.22
PTN-201ENST00000348225 HIST3H2BBQ8N257 126 aa13.71□□□□□ -0.22
PTN-201ENST00000348225 IGHV3-16A0A0C4DH30 117 aa13.7□□□□□ -0.22
PTN-201ENST00000348225 RBMY1A1P0DJD3 496 aaKnown RBP13.7□□□□□ -0.22
PTN-201ENST00000348225 RBMY1CP0DJD4 496 aa13.7□□□□□ -0.22
PTN-201ENST00000348225 RBMY1FQ15415 496 aaKnown RBP13.7□□□□□ -0.22
PTN-201ENST00000348225 DMRTA1Q5VZB9 504 aa13.7□□□□□ -0.22
PTN-201ENST00000348225 AMN1Q8IY45 258 aa13.7□□□□□ -0.22
PTN-201ENST00000348225 Q8N1Y9 231 aa13.7□□□□□ -0.22
PTN-201ENST00000348225 CBY3A6NI87 242 aa13.69□□□□□ -0.22
PTN-201ENST00000348225 M0R381 172 aa13.69□□□□□ -0.22
PTN-201ENST00000348225 C18orf32Q8TCD1 76 aa13.69□□□□□ -0.22
PTN-201ENST00000348225 WFDC10AQ9H1F0 79 aa13.69□□□□□ -0.22
PTN-201ENST00000348225 TP53TG3Q9ULZ0 132 aa13.69□□□□□ -0.22
PTN-201ENST00000348225 PDZD11Q5EBL8 140 aa13.68□□□□□ -0.22
PTN-201ENST00000348225 LINC00467Q9BRT7 94 aa13.68□□□□□ -0.22
PTN-201ENST00000348225 NXPH4O95158 308 aa13.68□□□□□ -0.22
PTN-201ENST00000348225 AKR1D1P51857 326 aa13.68□□□□□ -0.22
PTN-201ENST00000348225 MORN3Q6PF18 240 aaPredicted RBP13.68□□□□□ -0.22
PTN-201ENST00000348225 TMEM256Q8N2U0 113 aa13.68□□□□□ -0.22
PTN-201ENST00000348225 C9orf85Q96MD7 179 aa13.68□□□□□ -0.22
PTN-201ENST00000348225 XCL2Q9UBD3 114 aa13.68□□□□□ -0.22
PTN-201ENST00000348225 MRPL51Q4U2R6 128 aaKnown RBP13.67□□□□□ -0.22
PTN-201ENST00000348225 ORMDL3Q8N138 153 aa13.67□□□□□ -0.22
PTN-201ENST00000348225 LINC01587Q99440 93 aa13.67□□□□□ -0.22
PTN-201ENST00000348225 IGLL1P15814 213 aa13.66□□□□□ -0.22
PTN-201ENST00000348225 SYT8Q8NBV8 401 aa13.66□□□□□ -0.22
PTN-201ENST00000348225 AP1S3Q96PC3 154 aa13.66□□□□□ -0.22
PTN-201ENST00000348225 TMEM208Q9BTX3 173 aa13.66□□□□□ -0.22
PTN-201ENST00000348225 C1QTNF4Q9BXJ3 329 aa13.66□□□□□ -0.22
PTN-201ENST00000348225 MDFICQ9P1T7 246 aa13.66□□□□□ -0.22
PTN-201ENST00000348225 D6R8Y8 96 aa13.65□□□□□ -0.22
PTN-201ENST00000348225 WIPF1O43516 503 aa13.65□□□□□ -0.22
PTN-201ENST00000348225 SERF1AO75920 110 aa13.65□□□□□ -0.22
PTN-201ENST00000348225 PPBPP02775 128 aa13.65□□□□□ -0.22
PTN-201ENST00000348225 RAB4AP20338 218 aa13.65□□□□□ -0.22
PTN-201ENST00000348225 EVI2AP22794 236 aa13.65□□□□□ -0.22
PTN-201ENST00000348225 U3KQK5 164 aa13.65□□□□□ -0.22
PTN-201ENST00000348225 ESDP10768 282 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 HTN1P15515 57 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 RPL35AP18077 110 aaKnown RBP13.64□□□□□ -0.23
PTN-201ENST00000348225 CKS2P33552 79 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 IQCJQ1A5X6 159 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 DEFB125Q8N687 156 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 VWFP04275 2813 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 IFITM10A6NMD0 228 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 SPRY2O43597 315 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 ZNF415Q09FC8 603 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 TMEM18Q96B42 140 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 PRELID3AQ96N28 172 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 DPH3P1Q9H4G8 78 aa13.64□□□□□ -0.23
PTN-201ENST00000348225 FABP4P15090 132 aa13.63□□□□□ -0.23
PTN-201ENST00000348225 HIST1H2BLQ99880 126 aa13.63□□□□□ -0.23
PTN-201ENST00000348225 GOLT1BQ9Y3E0 138 aa13.63□□□□□ -0.23
PTN-201ENST00000348225 FBN1P35555 2871 aaKnown RBP13.62□□□□□ -0.23
PTN-201ENST00000348225 LINC00310P59036 64 aa13.62□□□□□ -0.23
PTN-201ENST00000348225 RCHY1Q96PM5 261 aa13.62□□□□□ -0.23
PTN-201ENST00000348225 LAMTOR2Q9Y2Q5 125 aa13.62□□□□□ -0.23
PTN-201ENST00000348225 SMIM17P0DL12 118 aa13.61□□□□□ -0.23
PTN-201ENST00000348225 C1orf158Q8N1D5 194 aa13.61□□□□□ -0.23
PTN-201ENST00000348225 NUPR1O60356 82 aa13.61□□□□□ -0.23
PTN-201ENST00000348225 C14orf178Q8N769 122 aaPredicted RBP13.61□□□□□ -0.23
PTN-201ENST00000348225 MRAP2Q96G30 205 aa13.61□□□□□ -0.23
PTN-201ENST00000348225 MUC4Q99102 2169 aa13.61□□□□□ -0.23
PTN-201ENST00000348225 NCR2O95944 276 aa13.6□□□□□ -0.23
PTN-201ENST00000348225 RNASEKQ6P5S7 137 aaKnown RBP13.6□□□□□ -0.23
PTN-201ENST00000348225 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
PTN-201ENST00000348225 SAMD10Q9BYL1 202 aa13.6□□□□□ -0.23
PTN-201ENST00000348225 IGHV3OR16-12A0A075B7B8 117 aa13.59□□□□□ -0.23
PTN-201ENST00000348225 SMKR1H3BMG3 65 aa13.59□□□□□ -0.23
PTN-201ENST00000348225 GIG44P09565 113 aaPredicted RBP13.59□□□□□ -0.23
PTN-201ENST00000348225 NIT1Q86X76 327 aa13.59□□□□□ -0.23
PTN-201ENST00000348225 CHCHD1Q96BP2 118 aaKnown RBP13.59□□□□□ -0.23
PTN-201ENST00000348225 HSBP1O75506 76 aa13.58□□□□□ -0.24
PTN-201ENST00000348225 ZNF876PQ49A33 203 aa13.58□□□□□ -0.24
PTN-201ENST00000348225 OR10D4PQ8NGN7 298 aa13.58□□□□□ -0.24
PTN-201ENST00000348225 SPXQ9BT56 116 aa13.58□□□□□ -0.24
PTN-201ENST00000348225 CSTL1Q9H114 145 aa13.58□□□□□ -0.24
PTN-201ENST00000348225 TRRAPQ9Y4A5 3859 aa13.58□□□□□ -0.24
PTN-201ENST00000348225 M0R2P5 195 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 MGPP08493 103 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 PIK3CD-AS1Q5SR53 167 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 PTH2Q96A98 100 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 NPYP01303 97 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 LINC00614P0C842 121 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 C11orf72Q8NBR9 251 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 PRSS3P2Q8NHM4 247 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 MAP1LC3AQ9H492 121 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 KIF25-AS1Q9Y6Z4 181 aa13.57□□□□□ -0.24
PTN-201ENST00000348225 TNFRSF6BO95407 300 aa13.56□□□□□ -0.24
PTN-201ENST00000348225 AMTP48728 403 aa13.56□□□□□ -0.24
PTN-201ENST00000348225 PRM2P04554 102 aa13.55□□□□□ -0.24
PTN-201ENST00000348225 PMCHP20382 165 aa13.55□□□□□ -0.24
PTN-201ENST00000348225 FA2HQ7L5A8 372 aa13.55□□□□□ -0.24
PTN-201ENST00000348225 POM121L12Q8N7R1 296 aa13.55□□□□□ -0.24
PTN-201ENST00000348225 CSNK1G2-AS1Q8NCQ2 148 aa13.55□□□□□ -0.24
PTN-201ENST00000348225 TMEM263Q8WUH6 116 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms