RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 LINC00173Q6ZV60 143 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 MRPL36Q9P0J6 103 aaKnown RBP8.51□□□□□ -1.05
CLCN6-202ENST00000346436 COX11Q9Y6N1 276 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 TRBV19A0A075B6N1 114 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 A0A096LPF7 62 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 IGKCP01834 107 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 TIRAPP58753 221 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 PRSS29PA6NIE9 313 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
CLCN6-202ENST00000346436 P0C879 139 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 POU2AF1Q16633 256 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 CFHR4Q92496 578 aa8.5□□□□□ -1.05
CLCN6-202ENST00000346436 KIR2DL5BA0A0G2JN68 375 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 KIR2DL5BA0A0G2JPC4 375 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 IGLC7A0M8Q6 106 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 KIR2DL5AQ8N109 375 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 FANCD2OSQ96PS1 177 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 NOTCH3Q9UM47 2321 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 HLA-DMBP28068 263 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 IGLC1P0CG04 106 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 DEFB135Q30KP9 77 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 FAM231DQ6ZW35 169 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 DNAJC30Q96LL9 226 aa8.49□□□□□ -1.05
CLCN6-202ENST00000346436 BLCAPP62952 87 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 TIMM21Q9BVV7 248 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 TRAV12-2A0A075B6T6 113 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 BCL6BQ8N143 479 aaPredicted RBP8.48□□□□□ -1.05
CLCN6-202ENST00000346436 NPBQ8NG41 125 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 ZNF492Q9P255 531 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 IGHV3-64A0A075B6Q5 118 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 A0A1B0GWB2 263 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 GFRA4Q9GZZ7 299 aa8.48□□□□□ -1.05
CLCN6-202ENST00000346436 PLXNB1O43157 2135 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 NCKAP5O14513 1909 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 C19orf84I3L1E1 186 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 FAM167A-AS1Q96KT0 104 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 K7EMT4 169 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 TAL2Q16559 108 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 ANXA2RQ3ZCQ2 193 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 C22orf34Q6ZV56 151 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 NEGR1Q7Z3B1 354 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 U3KQE9 123 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 IGHV4OR15-8A0A075B7B6 117 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 A0A087WW49 117 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 KIR3DS1Q14943 382 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 TANC2Q9HCD6 1990 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 H3BRN7 92 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 HSD52Q0P140 79 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 CPAMD8Q8IZJ3 1885 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 PIEZO2Q9H5I5 2752 aa8.47□□□□□ -1.05
CLCN6-202ENST00000346436 GYPEP15421 78 aa8.46□□□□□ -1.05
CLCN6-202ENST00000346436 SAMD5Q5TGI4 173 aa8.46□□□□□ -1.05
CLCN6-202ENST00000346436 C5orf56Q8N8D9 126 aa8.46□□□□□ -1.05
CLCN6-202ENST00000346436 PMVKQ15126 192 aa8.46□□□□□ -1.05
CLCN6-202ENST00000346436 ATXN8Q156A1 80 aa8.46□□□□□ -1.05
CLCN6-202ENST00000346436 PRR25Q96S07 402 aa8.46□□□□□ -1.05
CLCN6-202ENST00000346436 LENEPQ9Y5L5 61 aa8.46□□□□□ -1.05
CLCN6-202ENST00000346436 LTAP01374 205 aa8.46□□□□□ -1.06
CLCN6-202ENST00000346436 IGHG2P01859 326 aa8.46□□□□□ -1.06
CLCN6-202ENST00000346436 MRPL51Q4U2R6 128 aaKnown RBP8.46□□□□□ -1.06
CLCN6-202ENST00000346436 ZC2HC1BQ5TFG8 222 aa8.46□□□□□ -1.06
CLCN6-202ENST00000346436 Q6YL49 198 aa8.46□□□□□ -1.06
CLCN6-202ENST00000346436 TMEM14CQ9P0S9 112 aa8.46□□□□□ -1.06
CLCN6-202ENST00000346436 TMEM141Q96I45 108 aa8.46□□□□□ -1.06
CLCN6-202ENST00000346436 AJUBAQ96IF1 538 aa8.46□□□□□ -1.06
CLCN6-202ENST00000346436 C2orf70A6NJV1 201 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 APRG1Q8IVJ8 170 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 KIAA1549Q9HCM3 1950 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 ATG2AQ2TAZ0 1938 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 CACNA1AO00555 2505 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 GPHB5Q86YW7 130 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 NPYP01303 97 aa8.45□□□□□ -1.06
CLCN6-202ENST00000346436 MRPL52Q86TS9 123 aaKnown RBP8.45□□□□□ -1.06
CLCN6-202ENST00000346436 A6NDX4 124 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 ZNF491Q8N8L2 437 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 RPL18AQ02543 176 aaKnown RBP8.44□□□□□ -1.06
CLCN6-202ENST00000346436 EIF4EBP1Q13541 118 aaPredicted RBP8.44□□□□□ -1.06
CLCN6-202ENST00000346436 CT83Q5H943 113 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 GTSF1Q8WW33 167 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 TP73-AS1Q9UF72 201 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 BUB3O43684 328 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 NFE4Q86UQ8 179 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 IGHV7-81A0A0B4J1V7 117 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 SIRPDQ9H106 197 aa8.44□□□□□ -1.06
CLCN6-202ENST00000346436 DYSFO75923 2080 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 HIST2H2BCQ6DN03 193 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 MTURNQ8N3F0 131 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 CDH23Q9H251 3354 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 VWC2LB2RUY7 222 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 HLA-DRB4P13762 266 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 HLA-DRB4X5D2U9 266 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms