RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ATP1A1-AS1Q5TC04 95 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 ZNF625Q96I27 306 aaPredicted RBP2.95□□□□□ -1.94
SYNE2-202ENST00000344113 PCDH15Q96QU1 1955 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 BDP1A6H8Y1 2624 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 LAMB2P55268 1798 aa2.95□□□□□ -1.94
SYNE2-202ENST00000344113 MYO16Q9Y6X6 1858 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 TEX49A0A1B0GTD5 131 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 HHLA3Q9XRX5 114 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 HCP5Q6MZN7 132 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 LINC01587Q99440 93 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 SPRY3O43610 288 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 PIK3CD-AS1Q5SR53 167 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 P0C879 139 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 LINC01555Q8NAE3 123 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 DPM3Q9P2X0 92 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 TRGV2A0A075B6R0 118 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 ATP11AUNQ6ZP68 121 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 XAGE1AQ9HD64 81 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 PMS2P5A8MQ11 134 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 FHL1Q13642 323 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 DCTN5Q9BTE1 182 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 CCL17Q92583 94 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 TICRRQ7Z2Z1 1910 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 NANOS2P60321 138 aaKnown RBP2.94□□□□□ -1.94
SYNE2-202ENST00000344113 C12orf77C9JDV5 145 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 GNLYP22749 145 aa2.94□□□□□ -1.94
SYNE2-202ENST00000344113 ARFGEF2Q9Y6D5 1785 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 A0A087WZ39 114 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 COX17Q14061 63 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 C16orf97H3BN30 126 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 SND1-IT1Q9HBX3 110 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 PYGO1Q9Y3Y4 419 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 C19orf71A6NCJ1 209 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 PRYO14603 147 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 HRKO00198 91 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 RPL28P46779 137 aaKnown RBP2.93□□□□□ -1.94
SYNE2-202ENST00000344113 WDR86Q86TI4 376 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 SLC22A18ASQ8N1D0 253 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 CCL13Q99616 98 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 HIGD2AQ9BW72 106 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 STRCP1A6NGW2 1772 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 TGFBR3LH3BV60 316 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 M0R1W7 72 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 CELA3BP08861 270 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 ARMS2P0C7Q2 107 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 ELOF1P60002 83 aaKnown RBP2.93□□□□□ -1.94
SYNE2-202ENST00000344113 LTN1O94822 1766 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 HTN1P15515 57 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 EML5Q05BV3 1969 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 DIAPH2-AS1Q14236 149 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 Q8N9L7 120 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 IGF2BP2-AS1Q96M15 143 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 DEFB108BQ8NET1 73 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 ZNF503Q96F45 646 aa2.93□□□□□ -1.94
SYNE2-202ENST00000344113 CD177Q8N6Q3 437 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 ZFYVE26Q68DK2 2539 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 IGHV4-4A0A075B6R2 117 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 POM121L12Q8N7R1 296 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 IGHV3-33P01772 117 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 RETNLBQ9BQ08 111 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 LST1O00453 97 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 DIRC1Q969H9 104 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 C4orf3Q8WVX3 66 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 C3orf36Q3SXR2 165 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 MUC6Q6W4X9 2439 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 LINC00173Q6ZV60 143 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 LY75O60449 1722 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 TRAV4A0A0B4J268 109 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 MINOS1Q5TGZ0 78 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 MINOS1-NBL1R4GNA1 71 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 ENHOQ6UWT2 76 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 DOCK4Q8N1I0 1966 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 C7orf65Q6ZTY9 151 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 FAM182BQ5T319 152 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 C17orf100A8MU93 164 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 EPM2AB3EWF7 344 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 FAM30AQ9NZY2 134 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 IGHV1OR15-1A0A075B7D0 117 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 WI2-2373I1.2A0A1W2PRP0 233 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 IMMP1LQ96LU5 166 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 BRI3O95415 125 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 JMJD1CQ15652 2540 aa2.92□□□□□ -1.94
SYNE2-202ENST00000344113 NDUFA1O15239 70 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 XCL1P47992 114 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 XCL2Q9UBD3 114 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 Q6ZVQ6 151 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 KIAA1549Q9HCM3 1950 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 PLA2G5P39877 138 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 TIRAPP58753 221 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 KIAA1671Q9BY89 1806 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 Q8N6K4 173 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 NHSQ6T4R5 1651 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 FAM120AOSQ5T036 256 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 DEPPQ9NTK1 212 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 TRBV10-1A0A0K0K1A3 114 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 AVPP01185 164 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 IGHV3-9P01782 118 aa2.91□□□□□ -1.94
SYNE2-202ENST00000344113 IGHV1OR21-1A0A087WYE8 117 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms