RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 RPL39LQ96EH5 51 aaKnown RBP3.72□□□□□ -1.81
CSMD3-203ENST00000343508 LINC01619G3V211 115 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 ATOX1O00244 68 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 TCL1BO95988 128 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 DKK4Q9UBT3 224 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 MRPL23Q16540 153 aaKnown RBP3.72□□□□□ -1.81
CSMD3-203ENST00000343508 CACNA1EQ15878 2313 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 IGLV1-47P01700 117 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 LINC00310P59036 64 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 ICE1Q9Y2F5 2266 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 OVOL3O00110 214 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 CGB3P0DN86 165 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 CGB7P0DN87 165 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 MUSTN1Q8IVN3 82 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 C1orf159Q96HA4 380 aa3.72□□□□□ -1.81
CSMD3-203ENST00000343508 NDUFV3P56181 108 aaKnown RBP3.71□□□□□ -1.81
CSMD3-203ENST00000343508 FAM236AA0A1B0GUQ0 79 aa3.71□□□□□ -1.81
CSMD3-203ENST00000343508 FAM236BA0A1B0GV22 79 aa3.71□□□□□ -1.81
CSMD3-203ENST00000343508 CTSGP08311 255 aa3.71□□□□□ -1.81
CSMD3-203ENST00000343508 PTPRBP23467 1997 aa3.71□□□□□ -1.81
CSMD3-203ENST00000343508 H3BUX3 64 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 PLA2G5P39877 138 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 TRAV13-1A0A0B4J241 112 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 TRGV4A0A0C4DH28 118 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 SPINK13Q1W4C9 94 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 UFSP1Q6NVU6 142 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 NEXN-AS1Q8NBZ9 246 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 MSRB1Q9NZV6 116 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 LGALS9O00182 355 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 HOXB4P17483 251 aaPredicted RBP3.71□□□□□ -1.82
CSMD3-203ENST00000343508 RNF152Q8N8N0 203 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 GNRH2O43555 120 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 GATA3P23771 443 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 LINC01620Q4KN68 170 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 SMIM20Q8N5G0 67 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 SS18Q15532 418 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 IMUPQ9GZP8 106 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 FAM215AQ9Y5M1 114 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 TRGV1A0A0A0MS02 117 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 IGLC6P0CF74 106 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 SUMO4Q6EEV6 95 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 PRSS33Q8NF86 280 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 MRPL36Q9P0J6 103 aaKnown RBP3.71□□□□□ -1.82
CSMD3-203ENST00000343508 SLC25A29Q8N8R3 303 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 TTTY13Q9BZ97 58 aa3.71□□□□□ -1.82
CSMD3-203ENST00000343508 C16orf54Q6UWD8 224 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 BPESC1Q9GZL8 116 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 MDFICQ9P1T7 246 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 PCNX2A6NKB5 2137 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 PLA2G2CQ5R387 149 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 CHCHD5Q9BSY4 110 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 LAMTOR3Q9UHA4 124 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV7-4-1A0A0J9YVY3 117 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 VWC2LB2RUY7 222 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 J3KT08 172 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 JPT2Q9H910 190 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 G3V318 75 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 DSCR9P59020 149 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 CNFNQ9BYD5 112 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 DSCR8Q96T75 97 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 BAALC-AS2P0C853 105 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 DAZAP2Q15038 168 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-203ENST00000343508 SPRY4Q9C004 299 aa3.7□□□□□ -1.82
CSMD3-203ENST00000343508 UQCRQO14949 82 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 P0DMU3 169 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 FAM231AP0DMU4 169 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 FAM231CP0DMU5 169 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 ZNF625Q96I27 306 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-203ENST00000343508 IGLV2-11P01706 119 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 LOXL1Q08397 574 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV7-81A0A0B4J1V7 117 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 CRIP1P50238 77 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 MT-ATP8P03928 68 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 B4DSR2 109 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 PF4P02776 101 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 RPL32P62910 135 aaKnown RBP3.69□□□□□ -1.82
CSMD3-203ENST00000343508 CFAP126Q5VTH2 177 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 C1orf229Q6ZS94 237 aaPredicted RBP3.69□□□□□ -1.82
CSMD3-203ENST00000343508 ZGRF1Q86YA3 2104 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 C10orf142B7Z368 130 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 KLK9Q9UKQ9 250 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 TRAV12-2A0A075B6T6 113 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 COX6B1P14854 86 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 RPL39P62891 51 aaKnown RBP3.69□□□□□ -1.82
CSMD3-203ENST00000343508 ORMDL1Q9P0S3 153 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 TP73-AS1Q9UF72 201 aa3.69□□□□□ -1.82
CSMD3-203ENST00000343508 H0YGX0 51 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 LY6HO94772 140 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 BRD3OSQ6XYD6 125 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 PIP4P2Q8N4L2 257 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 RNF183Q96D59 192 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 URB1-AS1Q96HZ7 61 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 Q8N9W7 124 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 FAM186AA6NE01 2351 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 IGHV1-58A0A0C4DH39 117 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 H3BQ85 93 aa3.68□□□□□ -1.82
CSMD3-203ENST00000343508 ZNF80P51504 273 aaPredicted RBP3.68□□□□□ -1.82
CSMD3-203ENST00000343508 DAZ2Q13117 558 aaKnown RBP3.68□□□□□ -1.82
CSMD3-203ENST00000343508 DAZ4Q86SG3 579 aaKnown RBP3.68□□□□□ -1.82
CSMD3-203ENST00000343508 DAZ3Q9NR90 486 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms