RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 C8orf31Q8N9H6 132 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 COL5A1P20908 1838 aaPredicted RBP9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 INS-IGF2F8WCM5 200 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 BOD1L2Q8IYS8 172 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 BUB3O43684 328 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 UBE2E1P51965 193 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 MYMXA0A1B0GTQ4 84 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 SDHAF1A6NFY7 115 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 C9JAW5 83 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 MYCNOSP40205 109 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 LINC00574Q9H8X3 128 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 ERG28Q9UKR5 140 aa9.64□□□□□ -0.87
SNRNP48-201ENST00000342415 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 CKS1BP61024 79 aa9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 VCYO14598 125 aa9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 ZFP36P26651 326 aaKnown RBP9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 RNASE1P07998 156 aaKnown RBP9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
SNRNP48-201ENST00000342415 GAGE12HA6NDE8 117 aa9.62□□□□□ -0.87
SNRNP48-201ENST00000342415 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
SNRNP48-201ENST00000342415 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
SNRNP48-201ENST00000342415 ACANP16112 2415 aa9.62□□□□□ -0.87
SNRNP48-201ENST00000342415 ODF1Q14990 250 aa9.62□□□□□ -0.87
SNRNP48-201ENST00000342415 A0A087WX48 190 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 WI2-2373I1.2A0A1W2PRP0 233 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 Q8N9W7 124 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 Q8NA96 180 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 OR11H6Q8NGC7 330 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 IGF1P05019 195 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 MSRB2Q9Y3D2 182 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 IGHV3-53P01767 116 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 BLCAPP62952 87 aa9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
SNRNP48-201ENST00000342415 IGHV3-16A0A0C4DH30 117 aa9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 HOXB4P17483 251 aaPredicted RBP9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 ANAPC13Q9BS18 74 aa9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 DAZ1Q9NQZ3 744 aaKnown RBP9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 IGLL5B9A064 214 aa9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 DUSP14O95147 198 aaKnown RBP9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 JPT2Q9H910 190 aa9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 FGF6P10767 208 aa9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 RPL39P62891 51 aaKnown RBP9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 TEX29Q8N6K0 151 aa9.6□□□□□ -0.87
SNRNP48-201ENST00000342415 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
SNRNP48-201ENST00000342415 SIVA1O15304 175 aa9.59□□□□□ -0.87
SNRNP48-201ENST00000342415 OR13C6PQ8NH95 151 aa9.59□□□□□ -0.87
SNRNP48-201ENST00000342415 UBE2L6O14933 153 aa9.59□□□□□ -0.87
SNRNP48-201ENST00000342415 TRBV12-3P01733 135 aa9.59□□□□□ -0.87
SNRNP48-201ENST00000342415 Q6ZQT7 251 aa9.59□□□□□ -0.87
SNRNP48-201ENST00000342415 CFAP47Q6ZTR5 3102 aa9.59□□□□□ -0.87
SNRNP48-201ENST00000342415 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
SNRNP48-201ENST00000342415 UBE2E2Q96LR5 201 aa9.58□□□□□ -0.88
SNRNP48-201ENST00000342415 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
SNRNP48-201ENST00000342415 UNQ9165/PRO28630Q6UXU0 137 aa9.58□□□□□ -0.88
SNRNP48-201ENST00000342415 PTH2Q96A98 100 aa9.58□□□□□ -0.88
SNRNP48-201ENST00000342415 F8W1H4 67 aa9.57□□□□□ -0.88
SNRNP48-201ENST00000342415 NPBQ8NG41 125 aa9.57□□□□□ -0.88
SNRNP48-201ENST00000342415 AGRNO00468 2067 aa9.57□□□□□ -0.88
SNRNP48-201ENST00000342415 CENPVL3A0A0U1RRI6 287 aa9.57□□□□□ -0.88
SNRNP48-201ENST00000342415 PMVKQ15126 192 aa9.57□□□□□ -0.88
SNRNP48-201ENST00000342415 DEFB131AP59861 70 aa9.56□□□□□ -0.88
SNRNP48-201ENST00000342415 RRN3P1Q2M238 152 aa9.56□□□□□ -0.88
SNRNP48-201ENST00000342415 TSPAN13O95857 204 aa9.56□□□□□ -0.88
SNRNP48-201ENST00000342415 TRAV13-1A0A0B4J241 112 aa9.56□□□□□ -0.88
SNRNP48-201ENST00000342415 ZNF493Q6ZR52 646 aa9.56□□□□□ -0.88
SNRNP48-201ENST00000342415 CRYGBP07316 175 aa9.56□□□□□ -0.88
SNRNP48-201ENST00000342415 FOXI2Q6ZQN5 318 aa9.56□□□□□ -0.88
SNRNP48-201ENST00000342415 PRRC2AP48634 2157 aaKnown RBP9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 IGHV1-69DA0A0B4J2H0 117 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 IGHV1-69P01742 117 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 MAPKAPK5-AS1Q8N8E1 139 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 PTPRBP23467 1997 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 TRAV8-3A0A0A6YYJ7 113 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 FAM223BA6NKX1 122 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 FAM223AQ8IWN6 122 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 ZNF462Q96JM2 2506 aa9.55□□□□□ -0.88
SNRNP48-201ENST00000342415 M0R2P5 195 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 USMG5Q96IX5 58 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 WDFY3Q8IZQ1 3526 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 J3QQQ9 107 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 IGHV4-38-2P0DP08 117 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 SMAD5-AS1Q9Y6J3 95 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 TRGV2A0A075B6R0 118 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 TMEM262E9PQX1 116 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 NRGNQ92686 78 aa9.54□□□□□ -0.88
SNRNP48-201ENST00000342415 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
SNRNP48-201ENST00000342415 ADGRG4Q8IZF6 3080 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms