RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 Q1RN00 199 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 OR11H1Q8NG94 326 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 OR11H2Q8NH07 326 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 A0A096LNJ9 63 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 ASIPP42127 132 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 MRPL16Q9NX20 251 aaKnown RBP9.64□□□□□ -0.87
LMX1A-202ENST00000342310 A0A1B0GW15 77 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 NPFFR1Q9GZQ6 430 aa9.64□□□□□ -0.87
LMX1A-202ENST00000342310 PSMB2P49721 201 aa9.63□□□□□ -0.87
LMX1A-202ENST00000342310 LAGE3Q14657 143 aa9.63□□□□□ -0.87
LMX1A-202ENST00000342310 LY6G5BQ8NDX9 201 aa9.63□□□□□ -0.87
LMX1A-202ENST00000342310 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
LMX1A-202ENST00000342310 SRSF8Q9BRL6 282 aaKnown RBP9.63□□□□□ -0.87
LMX1A-202ENST00000342310 NXT2Q9NPJ8 142 aaKnown RBP9.63□□□□□ -0.87
LMX1A-202ENST00000342310 SLC50A1Q9BRV3 221 aa9.63□□□□□ -0.87
LMX1A-202ENST00000342310 NBEAL2Q6ZNJ1 2754 aa9.63□□□□□ -0.87
LMX1A-202ENST00000342310 A0A1W2PPM0 123 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 J3QR89 54 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 PRB1P04280 392 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 PRM2P04554 102 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 PRR9Q5T870 116 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 MINOS1Q5TGZ0 78 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 KLHL30-AS1Q8NEE0 82 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 MINOS1-NBL1R4GNA1 71 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 FLNAP21333 2647 aaKnown RBP9.62□□□□□ -0.87
LMX1A-202ENST00000342310 IGHV4-39P01824 125 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 UCNP55089 124 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 VPS13CQ709C8 3753 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 K7EP34 96 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 MRPS12O15235 138 aaKnown RBP9.62□□□□□ -0.87
LMX1A-202ENST00000342310 CIDEAO60543 219 aa9.62□□□□□ -0.87
LMX1A-202ENST00000342310 RNASE13Q5GAN3 156 aaKnown RBP9.62□□□□□ -0.87
LMX1A-202ENST00000342310 FLNBO75369 2602 aaKnown RBP9.62□□□□□ -0.87
LMX1A-202ENST00000342310 AZU1P20160 251 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 NPC2P61916 151 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 DEFB136Q30KP8 78 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 CFAP161Q6P656 301 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 MOB4Q9Y3A3 225 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 A0A0U1RRA0 63 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 PRSS2P07478 247 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 C20orf173Q96LM9 149 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 PIMREGQ9BSJ6 248 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 A0A1W2PRX2 142 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 ODF3BA8MYP8 253 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
LMX1A-202ENST00000342310 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 H3BRM9 83 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 SRSF1Q07955 248 aaKnown RBP eCLIP9.6□□□□□ -0.87
LMX1A-202ENST00000342310 SIRPDQ9H106 197 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 IGHG4P01861 327 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 C1orf122Q6ZSJ8 110 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 DPF1Q92782 380 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 TRBV25-1A0A075B6N4 114 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 LMO4P61968 165 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 RPL39P62891 51 aaKnown RBP9.6□□□□□ -0.87
LMX1A-202ENST00000342310 LGALS9BQ3B8N2 356 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
LMX1A-202ENST00000342310 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
LMX1A-202ENST00000342310 ZNF815PA8K554 130 aa9.59□□□□□ -0.87
LMX1A-202ENST00000342310 PPBPP02775 128 aa9.59□□□□□ -0.87
LMX1A-202ENST00000342310 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
LMX1A-202ENST00000342310 TRAV21A0A0B4J279 112 aa9.59□□□□□ -0.88
LMX1A-202ENST00000342310 ADARB2-AS1A8MUL3 147 aa9.59□□□□□ -0.88
LMX1A-202ENST00000342310 C2orf66Q6UXQ4 117 aa9.59□□□□□ -0.88
LMX1A-202ENST00000342310 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.88
LMX1A-202ENST00000342310 CRXO43186 299 aaPredicted RBP9.58□□□□□ -0.88
LMX1A-202ENST00000342310 ATP5LO75964 103 aa9.58□□□□□ -0.88
LMX1A-202ENST00000342310 IGHV4-59P01825 116 aa9.58□□□□□ -0.88
LMX1A-202ENST00000342310 RAB9AP51151 201 aa9.58□□□□□ -0.88
LMX1A-202ENST00000342310 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
LMX1A-202ENST00000342310 ODF1Q14990 250 aa9.58□□□□□ -0.88
LMX1A-202ENST00000342310 C5orf56Q8N8D9 126 aa9.58□□□□□ -0.88
LMX1A-202ENST00000342310 SIGMAR1Q99720 223 aa9.58□□□□□ -0.88
LMX1A-202ENST00000342310 IGHV1-69DA0A0B4J2H0 117 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 IGHV1-69P01742 117 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 SUMO2P61956 95 aaKnown RBP9.57□□□□□ -0.88
LMX1A-202ENST00000342310 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 PTH2Q96A98 100 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 ITPR3Q14573 2671 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 TRBV7-1A0A0A6YYK4 115 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 SLC25A16P16260 332 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 TRAV8-2A0A0B4J237 113 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 AJUBAQ96IF1 538 aa9.57□□□□□ -0.88
LMX1A-202ENST00000342310 CLPSL1A2RUU4 121 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 IGLC6P0CF74 106 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 HLA-DRB4P13762 266 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 INSL3P51460 131 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 RAX2Q96IS3 184 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 HLA-DRB4X5D2U9 266 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 NDUFS8O00217 210 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 DUSP14O95147 198 aaKnown RBP9.56□□□□□ -0.88
LMX1A-202ENST00000342310 TP53TG1Q9Y2A0 90 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 FGF6P10767 208 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms