RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 COTL1Q14019 142 aa15.17■□□□□ 0.02
SPG7-202ENST00000341316 Q8N8P6 123 aa15.17■□□□□ 0.02
SPG7-202ENST00000341316 IGLV2-18A0A075B6J9 118 aa15.16■□□□□ 0.02
SPG7-202ENST00000341316 IGHV4-4A0A075B6R2 117 aa15.16■□□□□ 0.02
SPG7-202ENST00000341316 SAP30O75446 220 aa15.16■□□□□ 0.02
SPG7-202ENST00000341316 IGKCP01834 107 aa15.16■□□□□ 0.02
SPG7-202ENST00000341316 UFC1Q9Y3C8 167 aa15.16■□□□□ 0.02
SPG7-202ENST00000341316 SPANXN1Q5VSR9 72 aa15.15■□□□□ 0.02
SPG7-202ENST00000341316 OR2K2Q8NGT1 345 aa15.15■□□□□ 0.02
SPG7-202ENST00000341316 RNF223E7ERA6 249 aa15.15■□□□□ 0.02
SPG7-202ENST00000341316 ZNF843Q8N446 348 aa15.15■□□□□ 0.02
SPG7-202ENST00000341316 ZNF580Q9UK33 172 aa15.15■□□□□ 0.02
SPG7-202ENST00000341316 GTSCR1Q86UQ5 136 aa15.14■□□□□ 0.01
SPG7-202ENST00000341316 NRACQ8N912 160 aa15.14■□□□□ 0.01
SPG7-202ENST00000341316 GCSHP23434 173 aa15.14■□□□□ 0.01
SPG7-202ENST00000341316 TEX15Q9BXT5 2789 aa15.13■□□□□ 0.01
SPG7-202ENST00000341316 TRAV21A0A0B4J279 112 aa15.13■□□□□ 0.01
SPG7-202ENST00000341316 A0A1W2PPM0 123 aa15.13■□□□□ 0.01
SPG7-202ENST00000341316 RNASE4P34096 147 aaKnown RBP15.13■□□□□ 0.01
SPG7-202ENST00000341316 K7EMT4 169 aa15.13■□□□□ 0.01
SPG7-202ENST00000341316 SMIM17P0DL12 118 aa15.13■□□□□ 0.01
SPG7-202ENST00000341316 FXYD2P54710 66 aa15.13■□□□□ 0.01
SPG7-202ENST00000341316 ANXA2RQ3ZCQ2 193 aa15.13■□□□□ 0.01
SPG7-202ENST00000341316 J3QLI3 93 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 ATP5LO75964 103 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 DPM2O94777 84 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 PSMG4Q5JS54 123 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 ZC2HC1BQ5TFG8 222 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 CHAC1Q9BUX1 264 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 HIGD1BQ9P298 99 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 SPCS1Q9Y6A9 102 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 SMIM15Q7Z3B0 74 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 DCANP1Q8TF63 244 aa15.12■□□□□ 0.01
SPG7-202ENST00000341316 APRG1Q8IVJ8 170 aa15.11■□□□□ 0.01
SPG7-202ENST00000341316 CREBBPQ92793 2442 aa15.11■□□□□ 0.01
SPG7-202ENST00000341316 M0R381 172 aa15.1■□□□□ 0.01
SPG7-202ENST00000341316 SMIM13P0DJ93 91 aa15.1■□□□□ 0.01
SPG7-202ENST00000341316 TMEM160Q9NX00 188 aa15.1■□□□□ 0.01
SPG7-202ENST00000341316 GNRH2O43555 120 aa15.1■□□□□ 0.01
SPG7-202ENST00000341316 IGHV4-31P0DP07 118 aa15.1■□□□□ 0.01
SPG7-202ENST00000341316 LAGE3Q14657 143 aa15.1■□□□□ 0.01
SPG7-202ENST00000341316 MRPL35Q9NZE8 188 aaKnown RBP15.1■□□□□ 0.01
SPG7-202ENST00000341316 TRBV25-1A0A075B6N4 114 aa15.09■□□□□ 0.01
SPG7-202ENST00000341316 FSHBP01225 129 aa15.09■□□□□ 0.01
SPG7-202ENST00000341316 TLN2Q9Y4G6 2542 aa15.09■□□□□ 0.01
SPG7-202ENST00000341316 WFDC12Q8WWY7 111 aa15.09■□□□□ 0.01
SPG7-202ENST00000341316 K7ERJ3 54 aa15.08■□□□□ 0
SPG7-202ENST00000341316 FABP2P12104 132 aa15.08■□□□□ 0
SPG7-202ENST00000341316 SAMD5Q5TGI4 173 aa15.08■□□□□ 0
SPG7-202ENST00000341316 MYOZ3Q8TDC0 251 aa15.08■□□□□ 0
SPG7-202ENST00000341316 PRSS47A8MTI9 375 aa15.08■□□□□ 0
SPG7-202ENST00000341316 S100A4P26447 101 aaKnown RBP15.08■□□□□ 0
SPG7-202ENST00000341316 ASIPP42127 132 aa15.08■□□□□ 0
SPG7-202ENST00000341316 OR5A1Q8NGJ0 315 aa15.08■□□□□ 0
SPG7-202ENST00000341316 VPREB3Q9UKI3 123 aa15.08■□□□□ 0
SPG7-202ENST00000341316 APCP25054 2843 aa15.07■□□□□ 0
SPG7-202ENST00000341316 RNASE3P12724 160 aaKnown RBP15.07■□□□□ 0
SPG7-202ENST00000341316 Q6YL49 198 aa15.06■□□□□ 0
SPG7-202ENST00000341316 CR1P17927 2039 aa15.06■□□□□ 0
SPG7-202ENST00000341316 ZNF702PQ9H963 129 aa15.06■□□□□ 0
SPG7-202ENST00000341316 TRBV7-9A0A0J9YWB2 115 aa15.05■□□□□ 0
SPG7-202ENST00000341316 KLLNB2CW77 178 aa15.05■□□□□ 0
SPG7-202ENST00000341316 NEGR1Q7Z3B1 354 aa15.05■□□□□ 0
SPG7-202ENST00000341316 C14orf178Q8N769 122 aaPredicted RBP15.05■□□□□ 0
SPG7-202ENST00000341316 CSTL1Q9H114 145 aa15.05■□□□□ 0
SPG7-202ENST00000341316 BEX4Q9NWD9 120 aaPredicted RBP15.05■□□□□ 0
SPG7-202ENST00000341316 PHLDA3Q9Y5J5 127 aa15.05■□□□□ 0
SPG7-202ENST00000341316 TMEM89A2RUT3 159 aa15.05■□□□□ -0
SPG7-202ENST00000341316 RIPPLY3P57055 190 aa15.05■□□□□ -0
SPG7-202ENST00000341316 MAPKAPK5-AS1Q8N8E1 139 aa15.05■□□□□ -0
SPG7-202ENST00000341316 A0A087WX48 190 aa15.04■□□□□ -0
SPG7-202ENST00000341316 G3V4G9 280 aa15.04■□□□□ -0
SPG7-202ENST00000341316 HLA-DRB4P13762 266 aa15.04■□□□□ -0
SPG7-202ENST00000341316 MRAP2Q96G30 205 aa15.04■□□□□ -0
SPG7-202ENST00000341316 NHP2Q9NX24 153 aaKnown RBP15.04■□□□□ -0
SPG7-202ENST00000341316 HLA-DRB4X5D2U9 266 aa15.04■□□□□ -0
SPG7-202ENST00000341316 K7EMI3 77 aa15.04■□□□□ -0
SPG7-202ENST00000341316 HOXA3O43365 443 aaPredicted RBP15.04■□□□□ -0
SPG7-202ENST00000341316 ZNF688P0C7X2 276 aa15.04■□□□□ -0
SPG7-202ENST00000341316 ID1P41134 155 aa15.04■□□□□ -0
SPG7-202ENST00000341316 SYNJ2BPP57105 145 aa15.04■□□□□ -0
SPG7-202ENST00000341316 CEND1Q8N111 149 aa15.04■□□□□ -0
SPG7-202ENST00000341316 PHLDA1Q8WV24 401 aaPredicted RBP15.04■□□□□ -0
SPG7-202ENST00000341316 RASL10AQ92737 203 aa15.03■□□□□ -0
SPG7-202ENST00000341316 DUX5Q96PT3 197 aa15.03■□□□□ -0
SPG7-202ENST00000341316 IGHV4OR15-8A0A075B7B6 117 aa15.03■□□□□ -0
SPG7-202ENST00000341316 A0A087WW49 117 aa15.03■□□□□ -0
SPG7-202ENST00000341316 TM2D2Q9BX73 214 aa15.03■□□□□ -0
SPG7-202ENST00000341316 DEFB113Q30KQ7 82 aa15.02□□□□□ -0.01
SPG7-202ENST00000341316 Q5PR19 223 aa15.02□□□□□ -0.01
SPG7-202ENST00000341316 RPL39LQ96EH5 51 aaKnown RBP15.02□□□□□ -0.01
SPG7-202ENST00000341316 SMIM2Q9BVW6 85 aa15.02□□□□□ -0.01
SPG7-202ENST00000341316 MYO9AB2RTY4 2548 aa15.02□□□□□ -0.01
SPG7-202ENST00000341316 MED14OSP0DP75 135 aa15.01□□□□□ -0.01
SPG7-202ENST00000341316 DPH3P1Q9H4G8 78 aa15.01□□□□□ -0.01
SPG7-202ENST00000341316 LGALS1P09382 135 aaKnown RBP15.01□□□□□ -0.01
SPG7-202ENST00000341316 SORL1Q92673 2214 aa15□□□□□ -0.01
SPG7-202ENST00000341316 SONP18583 2426 aaKnown RBP15□□□□□ -0.01
SPG7-202ENST00000341316 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15□□□□□ -0.01
SPG7-202ENST00000341316 AGRNO00468 2067 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms