RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 LILRA5A6NI73 299 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 C17orf100A8MU93 164 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 TMEM258P61165 79 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 RPS19BP1Q86WX3 136 aaKnown RBP7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 IL17DQ8TAD2 202 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 DPH3P1Q9H4G8 78 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 V9GYY9 64 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 TRBV7-1A0A0A6YYK4 115 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 TRAV12-1A0A0B4J245 112 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 PRSS2P07478 247 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 LOXP28300 417 aaPredicted RBP7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 CDSNQ15517 529 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 C17orf58Q2M2W7 97 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 LINC00311Q8N616 119 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 TRGV5A0A0B4J1U4 118 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 DLX6P56179 175 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 SHANK2-AS3Q9BTD1 123 aa7.36□□□□□ -1.23
PTCHD4-201ENST00000339488 RP1L1Q8IWN7 2480 aaPredicted RBP7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 IGHV3-72A0A0B4J1Y9 119 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 IGKV3D-7A0A0C4DH55 119 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 FAM240AA0A1B0GVK7 77 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 PINLYPA6NC86 204 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 LINC01561Q8N1V8 128 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 MDS2Q8NDY4 140 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 IGHV1OR21-1A0A087WYE8 117 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 FAM223AQ8IWN6 122 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 DMXL1Q9Y485 3027 aa7.35□□□□□ -1.23
PTCHD4-201ENST00000339488 IGLV4-69A0A075B6H9 119 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 IGHV3OR16-8A0A075B7F1 116 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 SCRG1O75711 98 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 RNF182Q8N6D2 247 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 SAP25Q8TEE9 199 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 ICOSQ9Y6W8 199 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 LINC01559Q495D7 138 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 DEFB108BQ8NET1 73 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 AMELXQ99217 191 aa7.34□□□□□ -1.23
PTCHD4-201ENST00000339488 TMEM223A0PJW6 202 aa7.34□□□□□ -1.24
PTCHD4-201ENST00000339488 IQCF6A8MYZ5 107 aa7.34□□□□□ -1.24
PTCHD4-201ENST00000339488 FHL2Q14192 279 aa7.34□□□□□ -1.24
PTCHD4-201ENST00000339488 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.24
PTCHD4-201ENST00000339488 MUC6Q6W4X9 2439 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 CRYGBP07316 175 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 CCL11P51671 97 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 PRB3Q04118 309 aaPredicted RBP7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 LINC00643Q86TS7 51 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 IMUPQ9GZP8 106 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 PEMTQ9UBM1 199 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 A0A1W2PRX2 142 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 TIMM8AO60220 97 aaPredicted RBP7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 SUB1P53999 127 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 TOMM6Q96B49 74 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 UPK3BQ9BT76 320 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 AGPAT4-IT1Q9H0P7 198 aa7.33□□□□□ -1.24
PTCHD4-201ENST00000339488 A0A1W2PPC4 97 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 H3BT86 120 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 RPL39P62891 51 aaKnown RBP7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 PRR7Q8TB68 274 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 C11orf21Q9P2W6 132 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 TPRP12270 2363 aaKnown RBP7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 A0A0B4J2C4 111 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 TRBV6-1A0A0K0K1D8 114 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 LY6LH3BQJ8 138 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 ATOX1O00244 68 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 NDPQ00604 133 aa7.32□□□□□ -1.24
PTCHD4-201ENST00000339488 C10orf142B7Z368 130 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 TSHBP01222 138 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 WT1P19544 449 aaPredicted RBP7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 TMEM105Q8N8V8 129 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 ROS1P08922 2347 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 EP300Q09472 2414 aaPredicted RBP7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 WNK2Q9Y3S1 2297 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 IGLV3-12A0A075B6K2 115 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 IGHV1-45A0A0A0MS14 117 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 IGHV1OR15-9A0A0B4J2B8 117 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 DLX1P56177 255 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 C5orf38Q86SI9 138 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 C9orf85Q96MD7 179 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 OPRPNQ99935 248 aaPredicted RBP7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 SCNM1Q9BWG6 230 aa7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 PRRC2AP48634 2157 aaKnown RBP7.31□□□□□ -1.24
PTCHD4-201ENST00000339488 TRBV30A0A0K0K1B3 111 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 IGLV3-19P01714 112 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 SYNJ2BPP57105 145 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 C16orf92Q96LL3 132 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 TMEM14CQ9P0S9 112 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 MAP1BP46821 2468 aaKnown RBP7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 I3L3M4 83 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 LYZL6O75951 148 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 CXXC4Q9H2H0 198 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 IGKV3D-20A0A0C4DH25 116 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 PRAC2D3DTV9 90 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 K7ENP7 123 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 MGPP08493 103 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 RPL18AQ02543 176 aaKnown RBP7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms