RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 PSCAO43653 123 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 ZNF876PQ49A33 203 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 SH2D6Q7Z4S9 175 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 FAM213BQ8TBF2 198 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 MAP1LC3BQ9GZQ8 125 aa13.16□□□□□ -0.3
ITGA4-202ENST00000339307 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
ITGA4-202ENST00000339307 C10orf126Q8N4M7 172 aa13.15□□□□□ -0.3
ITGA4-202ENST00000339307 NKX6-2Q9C056 277 aaPredicted RBP13.15□□□□□ -0.3
ITGA4-202ENST00000339307 APOBP04114 4563 aaKnown RBP13.15□□□□□ -0.3
ITGA4-202ENST00000339307 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 A0A1W2PRE2 83 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 GCGP01275 180 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 TCRAP04437 139 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 H2AFB1P0C5Y9 115 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 GATA1P15976 413 aaPredicted RBP13.14□□□□□ -0.31
ITGA4-202ENST00000339307 PRNTQ86SH4 94 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 C5orf17Q8NAS9 161 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 PRADC1Q9BSG0 188 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 PSG8Q9UQ74 426 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 ARL2-SNX15V9GYD0 113 aa13.14□□□□□ -0.31
ITGA4-202ENST00000339307 TRAV1-1A0A0B4J248 108 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 IGHV3-38A0A0C4DH36 116 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 FHITP49789 147 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 ZNF80P51504 273 aaPredicted RBP13.13□□□□□ -0.31
ITGA4-202ENST00000339307 SUMO1P63165 101 aaKnown RBP13.13□□□□□ -0.31
ITGA4-202ENST00000339307 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 SFT2D1Q8WV19 159 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 PFN1P07737 140 aaKnown RBP13.13□□□□□ -0.31
ITGA4-202ENST00000339307 SLC25A29Q8N8R3 303 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 TMEM75Q8N9X5 138 aa13.13□□□□□ -0.31
ITGA4-202ENST00000339307 SMUG1Q53HV7 270 aa13.12□□□□□ -0.31
ITGA4-202ENST00000339307 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
ITGA4-202ENST00000339307 EPDR1Q9UM22 224 aa13.12□□□□□ -0.31
ITGA4-202ENST00000339307 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
ITGA4-202ENST00000339307 KRTAP10-1P60331 282 aa13.11□□□□□ -0.31
ITGA4-202ENST00000339307 FLI1Q01543 452 aaPredicted RBP13.11□□□□□ -0.31
ITGA4-202ENST00000339307 RHOHQ15669 191 aa13.11□□□□□ -0.31
ITGA4-202ENST00000339307 CFAP126Q5VTH2 177 aa13.11□□□□□ -0.31
ITGA4-202ENST00000339307 Q9HAA7 133 aa13.11□□□□□ -0.31
ITGA4-202ENST00000339307 RS1O15537 224 aa13.1□□□□□ -0.31
ITGA4-202ENST00000339307 IGHV3-30P01768 117 aa13.1□□□□□ -0.31
ITGA4-202ENST00000339307 IGHV3-33P01772 117 aa13.1□□□□□ -0.31
ITGA4-202ENST00000339307 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
ITGA4-202ENST00000339307 IGHV3-30-5P0DP03 117 aa13.1□□□□□ -0.31
ITGA4-202ENST00000339307 GCSHP23434 173 aa13.1□□□□□ -0.31
ITGA4-202ENST00000339307 FGF8P55075 233 aaPredicted RBP13.1□□□□□ -0.31
ITGA4-202ENST00000339307 TCEAL7Q9BRU2 100 aa13.1□□□□□ -0.31
ITGA4-202ENST00000339307 PGPEP1LA6NFU8 196 aa13.09□□□□□ -0.31
ITGA4-202ENST00000339307 XGP55808 180 aa13.09□□□□□ -0.31
ITGA4-202ENST00000339307 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
ITGA4-202ENST00000339307 ALKAL2Q6UX46 152 aa13.09□□□□□ -0.31
ITGA4-202ENST00000339307 CYB561D1Q8N8Q1 229 aa13.09□□□□□ -0.31
ITGA4-202ENST00000339307 TRBV6-4A0A1B0GX49 114 aa13.08□□□□□ -0.32
ITGA4-202ENST00000339307 GGTLC3B5MD39 225 aa13.08□□□□□ -0.32
ITGA4-202ENST00000339307 CIDEAO60543 219 aa13.08□□□□□ -0.32
ITGA4-202ENST00000339307 S100A4P26447 101 aaKnown RBP13.08□□□□□ -0.32
ITGA4-202ENST00000339307 TIRAPP58753 221 aa13.08□□□□□ -0.32
ITGA4-202ENST00000339307 ZNF506Q5JVG8 444 aa13.08□□□□□ -0.32
ITGA4-202ENST00000339307 FRZBQ92765 325 aa13.08□□□□□ -0.32
ITGA4-202ENST00000339307 IGLV5-52A0A0A0MRZ9 124 aa13.07□□□□□ -0.32
ITGA4-202ENST00000339307 FAM74A7A6NL05 159 aa13.07□□□□□ -0.32
ITGA4-202ENST00000339307 IFNA7P01567 189 aa13.07□□□□□ -0.32
ITGA4-202ENST00000339307 LINC01556Q5JQF7 62 aa13.07□□□□□ -0.32
ITGA4-202ENST00000339307 SAPCD1Q5SSQ6 148 aa13.07□□□□□ -0.32
ITGA4-202ENST00000339307 C9orf85Q96MD7 179 aa13.07□□□□□ -0.32
ITGA4-202ENST00000339307 TRAV34A0A0B4J273 112 aa13.06□□□□□ -0.32
ITGA4-202ENST00000339307 IGLV2-11P01706 119 aa13.06□□□□□ -0.32
ITGA4-202ENST00000339307 INAFM2P0DMQ5 153 aa13.06□□□□□ -0.32
ITGA4-202ENST00000339307 ATP6V0E2Q8NHE4 81 aa13.06□□□□□ -0.32
ITGA4-202ENST00000339307 LINC00479Q96M42 142 aa13.06□□□□□ -0.32
ITGA4-202ENST00000339307 MANBALQ9NQG1 85 aa13.06□□□□□ -0.32
ITGA4-202ENST00000339307 IBA57-AS1B1ANH7 110 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 SMR3BP02814 79 aaPredicted RBP13.05□□□□□ -0.32
ITGA4-202ENST00000339307 MGST1P10620 155 aaKnown RBP13.05□□□□□ -0.32
ITGA4-202ENST00000339307 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
ITGA4-202ENST00000339307 UBE2G2P60604 165 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 Q5VSD8 79 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 TEX261Q6UWH6 196 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 HIST1H2BAQ96A08 127 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 RNASE3P12724 160 aaKnown RBP13.05□□□□□ -0.32
ITGA4-202ENST00000339307 HAMPP81172 84 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 LELP1Q5T871 98 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 GTSF1LQ9H1H1 148 aa13.05□□□□□ -0.32
ITGA4-202ENST00000339307 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
ITGA4-202ENST00000339307 GAGE1Q13065 139 aa13.04□□□□□ -0.32
ITGA4-202ENST00000339307 GAGE4Q13068 117 aa13.04□□□□□ -0.32
ITGA4-202ENST00000339307 GAGE5Q13069 117 aa13.04□□□□□ -0.32
ITGA4-202ENST00000339307 GAGE13Q4V321 117 aa13.04□□□□□ -0.32
ITGA4-202ENST00000339307 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
ITGA4-202ENST00000339307 PAGE4O60829 102 aa13.03□□□□□ -0.32
ITGA4-202ENST00000339307 IFNA1P01562 189 aa13.03□□□□□ -0.32
ITGA4-202ENST00000339307 ASIPP42127 132 aa13.03□□□□□ -0.32
ITGA4-202ENST00000339307 CST9LP1Q5W188 147 aa13.03□□□□□ -0.32
ITGA4-202ENST00000339307 FABP5P3A8MUU1 101 aa13.02□□□□□ -0.33
ITGA4-202ENST00000339307 PTH2Q96A98 100 aa13.02□□□□□ -0.33
ITGA4-202ENST00000339307 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
ITGA4-202ENST00000339307 LRCOL1A6NCL2 159 aa13.01□□□□□ -0.33
ITGA4-202ENST00000339307 A8MWV9 139 aa13.01□□□□□ -0.33
ITGA4-202ENST00000339307 Q6ZSN1 163 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms